Hb_000098_270

Information

Type -
Description -
Location Contig98: 283196-283519
Sequence    

Annotation

kegg
ID pvu:PHAVU_007G113700g
description hypothetical protein
nr
ID XP_012072628.1
description PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
swissprot
ID Q38806
description 22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1
trembl
ID A0A067KS43
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06695 PE=3 SV=1
Gene Ontology
ID GO:0005783
description kda class iv heat shock protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64376: 282187-282900
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000098_270 0.0 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
2 Hb_006351_030 0.0902534992 - - PREDICTED: E3 ubiquitin-protein ligase MARCH8-like [Jatropha curcas]
3 Hb_000289_020 0.0931140202 - - hypothetical protein CICLE_v10009323mg [Citrus clementina]
4 Hb_008725_100 0.101360977 - - PREDICTED: histone H1-like [Jatropha curcas]
5 Hb_006810_040 0.1051279015 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
6 Hb_010672_010 0.1057647067 - - hypothetical protein JCGZ_00895 [Jatropha curcas]
7 Hb_043552_010 0.1096132792 - - PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B isoform X1 [Jatropha curcas]
8 Hb_177195_010 0.110140968 - - Leucine-rich repeat protein kinase family protein isoform 3, partial [Theobroma cacao]
9 Hb_007126_010 0.1117799947 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
10 Hb_089140_070 0.1121144406 - - PREDICTED: uncharacterized protein LOC105637961 [Jatropha curcas]
11 Hb_000152_590 0.1129232555 - - PREDICTED: 21 kDa protein [Jatropha curcas]
12 Hb_006120_130 0.1181478901 - - -
13 Hb_001971_040 0.1207667253 - - PREDICTED: beta-glucosidase 44-like [Jatropha curcas]
14 Hb_000522_160 0.124029717 - - PREDICTED: probable serine/threonine-protein kinase At5g41260 [Jatropha curcas]
15 Hb_001141_440 0.1242214431 - - PREDICTED: uncharacterized protein LOC105631977 [Jatropha curcas]
16 Hb_000345_230 0.1268070604 - - -
17 Hb_002028_270 0.1279922818 - - Pectinesterase-1 precursor, putative [Ricinus communis]
18 Hb_000862_050 0.1293926934 transcription factor TF Family: GRAS DELLA protein RGL1, putative [Ricinus communis]
19 Hb_020025_030 0.1298723157 transcription factor TF Family: PHD PREDICTED: protein Jade-1 [Populus euphratica]
20 Hb_001782_100 0.1306148397 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]

Gene co-expression network

sample Hb_000098_270 Hb_000098_270 Hb_006351_030 Hb_006351_030 Hb_000098_270--Hb_006351_030 Hb_000289_020 Hb_000289_020 Hb_000098_270--Hb_000289_020 Hb_008725_100 Hb_008725_100 Hb_000098_270--Hb_008725_100 Hb_006810_040 Hb_006810_040 Hb_000098_270--Hb_006810_040 Hb_010672_010 Hb_010672_010 Hb_000098_270--Hb_010672_010 Hb_043552_010 Hb_043552_010 Hb_000098_270--Hb_043552_010 Hb_001025_100 Hb_001025_100 Hb_006351_030--Hb_001025_100 Hb_001782_100 Hb_001782_100 Hb_006351_030--Hb_001782_100 Hb_000152_590 Hb_000152_590 Hb_006351_030--Hb_000152_590 Hb_000878_120 Hb_000878_120 Hb_006351_030--Hb_000878_120 Hb_006916_120 Hb_006916_120 Hb_006351_030--Hb_006916_120 Hb_006120_130 Hb_006120_130 Hb_000289_020--Hb_006120_130 Hb_002028_270 Hb_002028_270 Hb_000289_020--Hb_002028_270 Hb_005211_170 Hb_005211_170 Hb_000289_020--Hb_005211_170 Hb_000289_020--Hb_043552_010 Hb_003464_010 Hb_003464_010 Hb_000289_020--Hb_003464_010 Hb_000862_050 Hb_000862_050 Hb_008725_100--Hb_000862_050 Hb_000592_100 Hb_000592_100 Hb_008725_100--Hb_000592_100 Hb_008725_100--Hb_006120_130 Hb_000010_440 Hb_000010_440 Hb_008725_100--Hb_000010_440 Hb_007126_010 Hb_007126_010 Hb_008725_100--Hb_007126_010 Hb_001971_040 Hb_001971_040 Hb_006810_040--Hb_001971_040 Hb_000522_160 Hb_000522_160 Hb_006810_040--Hb_000522_160 Hb_006810_040--Hb_002028_270 Hb_159809_040 Hb_159809_040 Hb_006810_040--Hb_159809_040 Hb_089140_070 Hb_089140_070 Hb_006810_040--Hb_089140_070 Hb_005332_030 Hb_005332_030 Hb_006810_040--Hb_005332_030 Hb_010672_010--Hb_000152_590 Hb_146901_020 Hb_146901_020 Hb_010672_010--Hb_146901_020 Hb_010672_010--Hb_000592_100 Hb_010672_010--Hb_001782_100 Hb_020025_030 Hb_020025_030 Hb_010672_010--Hb_020025_030 Hb_009252_080 Hb_009252_080 Hb_043552_010--Hb_009252_080 Hb_001709_090 Hb_001709_090 Hb_043552_010--Hb_001709_090 Hb_000375_260 Hb_000375_260 Hb_043552_010--Hb_000375_260 Hb_000162_190 Hb_000162_190 Hb_043552_010--Hb_000162_190 Hb_000310_040 Hb_000310_040 Hb_043552_010--Hb_000310_040 Hb_003992_020 Hb_003992_020 Hb_043552_010--Hb_003992_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.130237 0.765883 5.18432 6.6769 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.22518 0.393413

CAGE analysis