Hb_000101_210

Information

Type -
Description -
Location Contig101: 227142-230230
Sequence    

Annotation

kegg
ID rcu:RCOM_0592830
description hypothetical protein
nr
ID XP_012087690.1
description PREDICTED: uncharacterized protein LOC105646445 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LC66
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01303 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000101_210 0.0 - - PREDICTED: uncharacterized protein LOC105646445 [Jatropha curcas]
2 Hb_004206_040 0.1327786888 - - cytochrome P450, putative [Ricinus communis]
3 Hb_000544_120 0.1383982267 - - PREDICTED: thymidylate kinase [Jatropha curcas]
4 Hb_035360_010 0.1488004306 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
5 Hb_000779_040 0.1524777867 - - PREDICTED: protein FLX-like 4 [Jatropha curcas]
6 Hb_000211_080 0.1528940352 - - PREDICTED: probable isoleucine--tRNA ligase, cytoplasmic [Jatropha curcas]
7 Hb_000890_220 0.1568016857 transcription factor TF Family: SNF2 PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X1 [Jatropha curcas]
8 Hb_004007_150 0.1611593405 transcription factor TF Family: TAZ PREDICTED: BTB/POZ and TAZ domain-containing protein 4 [Jatropha curcas]
9 Hb_000212_130 0.1622134912 - - conserved hypothetical protein [Ricinus communis]
10 Hb_006631_010 0.1629997915 - - plasma membrane aquaporin 2 [Hevea brasiliensis]
11 Hb_000619_070 0.1632394398 - - PREDICTED: DNA mismatch repair protein MLH1 [Jatropha curcas]
12 Hb_000792_110 0.1641558876 - - PREDICTED: E3 ubiquitin-protein ligase Hakai [Jatropha curcas]
13 Hb_000189_420 0.167614528 - - PREDICTED: uncharacterized protein LOC105647665 [Jatropha curcas]
14 Hb_000590_080 0.16928926 - - PREDICTED: metal tolerance protein 11 [Jatropha curcas]
15 Hb_000018_160 0.1702737297 - - nitrate transporter, putative [Ricinus communis]
16 Hb_003673_020 0.1703654258 - - hypothetical protein JCGZ_20998 [Jatropha curcas]
17 Hb_000211_090 0.1797869967 - - hypothetical protein PHAVU_011G023400g, partial [Phaseolus vulgaris]
18 Hb_101151_020 0.1802833839 - - DNA binding protein, putative [Ricinus communis]
19 Hb_000608_340 0.1817919857 - - PREDICTED: putative RNA-binding protein Luc7-like 2 [Populus euphratica]
20 Hb_031073_010 0.1819329363 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Jatropha curcas]

Gene co-expression network

sample Hb_000101_210 Hb_000101_210 Hb_004206_040 Hb_004206_040 Hb_000101_210--Hb_004206_040 Hb_000544_120 Hb_000544_120 Hb_000101_210--Hb_000544_120 Hb_035360_010 Hb_035360_010 Hb_000101_210--Hb_035360_010 Hb_000779_040 Hb_000779_040 Hb_000101_210--Hb_000779_040 Hb_000211_080 Hb_000211_080 Hb_000101_210--Hb_000211_080 Hb_000890_220 Hb_000890_220 Hb_000101_210--Hb_000890_220 Hb_004206_040--Hb_000779_040 Hb_000792_110 Hb_000792_110 Hb_004206_040--Hb_000792_110 Hb_004206_040--Hb_000890_220 Hb_000016_180 Hb_000016_180 Hb_004206_040--Hb_000016_180 Hb_004206_040--Hb_035360_010 Hb_025048_040 Hb_025048_040 Hb_004206_040--Hb_025048_040 Hb_006631_010 Hb_006631_010 Hb_000544_120--Hb_006631_010 Hb_000544_120--Hb_035360_010 Hb_000619_070 Hb_000619_070 Hb_000544_120--Hb_000619_070 Hb_002897_040 Hb_002897_040 Hb_000544_120--Hb_002897_040 Hb_000173_210 Hb_000173_210 Hb_000544_120--Hb_000173_210 Hb_000018_160 Hb_000018_160 Hb_000544_120--Hb_000018_160 Hb_035360_010--Hb_000619_070 Hb_003673_020 Hb_003673_020 Hb_035360_010--Hb_003673_020 Hb_035360_010--Hb_000792_110 Hb_035360_010--Hb_000779_040 Hb_000608_340 Hb_000608_340 Hb_035360_010--Hb_000608_340 Hb_000211_090 Hb_000211_090 Hb_035360_010--Hb_000211_090 Hb_000779_040--Hb_000890_220 Hb_000779_040--Hb_000211_090 Hb_000779_040--Hb_000608_340 Hb_000779_040--Hb_000792_110 Hb_004531_090 Hb_004531_090 Hb_000779_040--Hb_004531_090 Hb_000779_040--Hb_003673_020 Hb_172256_010 Hb_172256_010 Hb_000211_080--Hb_172256_010 Hb_000211_080--Hb_003673_020 Hb_000211_080--Hb_000779_040 Hb_000211_080--Hb_000792_110 Hb_000211_080--Hb_035360_010 Hb_000211_080--Hb_000211_090 Hb_000890_220--Hb_000211_090 Hb_013753_010 Hb_013753_010 Hb_000890_220--Hb_013753_010 Hb_000890_220--Hb_000792_110 Hb_101151_020 Hb_101151_020 Hb_000890_220--Hb_101151_020 Hb_012760_200 Hb_012760_200 Hb_000890_220--Hb_012760_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
24.8981 8.18483 2.14216 1.45579 32.0216 22.8959
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.34591 1.06454 1.11683 6.79227 0.0730554

CAGE analysis