Hb_000101_220

Information

Type -
Description -
Location Contig101: 236791-248087
Sequence    

Annotation

kegg
ID rcu:RCOM_0592860
description anthranilate synthase component I, putative (EC:4.1.3.27)
nr
ID XP_002526888.1
description anthranilate synthase component I, putative [Ricinus communis]
swissprot
ID P32068
description Anthranilate synthase alpha subunit 1, chloroplastic OS=Arabidopsis thaliana GN=ASA1 PE=1 SV=1
trembl
ID B9SLL9
description Anthranilate synthase component I, putative OS=Ricinus communis GN=RCOM_0592860 PE=4 SV=1
Gene Ontology
ID GO:0005829
description anthranilate synthase alpha subunit chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000101_220 0.0 - - anthranilate synthase component I, putative [Ricinus communis]
2 Hb_046198_020 0.2076858787 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001195_190 0.235507137 - - conserved hypothetical protein [Ricinus communis]
4 Hb_010315_070 0.2422670458 - - -
5 Hb_007137_060 0.2731397568 - - Polyneuridine-aldehyde esterase precursor, putative [Ricinus communis]
6 Hb_000905_150 0.2759552102 - - Cytochrome P450 [Theobroma cacao]
7 Hb_013394_060 0.2773295351 - - PREDICTED: IST1-like protein isoform X1 [Jatropha curcas]
8 Hb_000206_130 0.2787703397 - - unnamed protein product [Vitis vinifera]
9 Hb_003125_140 0.2794421604 - - PREDICTED: uncharacterized protein LOC105648796 [Jatropha curcas]
10 Hb_020805_010 0.280939596 - - protein with unknown function [Ricinus communis]
11 Hb_100964_010 0.2821358579 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_007223_010 0.2834964295 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005510_010 0.2841947856 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 [Jatropha curcas]
14 Hb_000505_110 0.2846096241 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump [Jatropha curcas]
15 Hb_001433_020 0.2862679996 - - PREDICTED: bidirectional sugar transporter SWEET16-like [Jatropha curcas]
16 Hb_001059_080 0.2863041753 - - PREDICTED: F-box protein At1g61340-like [Musa acuminata subsp. malaccensis]
17 Hb_002344_090 0.2901109154 - - PREDICTED: uncharacterized protein LOC105637976 [Jatropha curcas]
18 Hb_007645_120 0.2910273425 - - hypothetical protein POPTR_0006s05370g [Populus trichocarpa]
19 Hb_168893_010 0.2912020534 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Nelumbo nucifera]
20 Hb_017491_070 0.2927921615 - - PREDICTED: dnaJ homolog subfamily B member 6-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000101_220 Hb_000101_220 Hb_046198_020 Hb_046198_020 Hb_000101_220--Hb_046198_020 Hb_001195_190 Hb_001195_190 Hb_000101_220--Hb_001195_190 Hb_010315_070 Hb_010315_070 Hb_000101_220--Hb_010315_070 Hb_007137_060 Hb_007137_060 Hb_000101_220--Hb_007137_060 Hb_000905_150 Hb_000905_150 Hb_000101_220--Hb_000905_150 Hb_013394_060 Hb_013394_060 Hb_000101_220--Hb_013394_060 Hb_168893_010 Hb_168893_010 Hb_046198_020--Hb_168893_010 Hb_046198_020--Hb_001195_190 Hb_011468_010 Hb_011468_010 Hb_046198_020--Hb_011468_010 Hb_000796_060 Hb_000796_060 Hb_046198_020--Hb_000796_060 Hb_007382_020 Hb_007382_020 Hb_046198_020--Hb_007382_020 Hb_010521_020 Hb_010521_020 Hb_001195_190--Hb_010521_020 Hb_004296_010 Hb_004296_010 Hb_001195_190--Hb_004296_010 Hb_000505_110 Hb_000505_110 Hb_001195_190--Hb_000505_110 Hb_001767_040 Hb_001767_040 Hb_001195_190--Hb_001767_040 Hb_001269_310 Hb_001269_310 Hb_001195_190--Hb_001269_310 Hb_000421_130 Hb_000421_130 Hb_001195_190--Hb_000421_130 Hb_004994_130 Hb_004994_130 Hb_010315_070--Hb_004994_130 Hb_002370_040 Hb_002370_040 Hb_010315_070--Hb_002370_040 Hb_100964_010 Hb_100964_010 Hb_010315_070--Hb_100964_010 Hb_007603_020 Hb_007603_020 Hb_010315_070--Hb_007603_020 Hb_000181_410 Hb_000181_410 Hb_010315_070--Hb_000181_410 Hb_001442_030 Hb_001442_030 Hb_007137_060--Hb_001442_030 Hb_002235_120 Hb_002235_120 Hb_007137_060--Hb_002235_120 Hb_077211_010 Hb_077211_010 Hb_007137_060--Hb_077211_010 Hb_004994_340 Hb_004994_340 Hb_007137_060--Hb_004994_340 Hb_130134_030 Hb_130134_030 Hb_007137_060--Hb_130134_030 Hb_020805_010 Hb_020805_010 Hb_007137_060--Hb_020805_010 Hb_005510_010 Hb_005510_010 Hb_000905_150--Hb_005510_010 Hb_000181_440 Hb_000181_440 Hb_000905_150--Hb_000181_440 Hb_003096_040 Hb_003096_040 Hb_000905_150--Hb_003096_040 Hb_007101_220 Hb_007101_220 Hb_000905_150--Hb_007101_220 Hb_003656_120 Hb_003656_120 Hb_000905_150--Hb_003656_120 Hb_002999_060 Hb_002999_060 Hb_013394_060--Hb_002999_060 Hb_000483_380 Hb_000483_380 Hb_013394_060--Hb_000483_380 Hb_002965_030 Hb_002965_030 Hb_013394_060--Hb_002965_030 Hb_000720_070 Hb_000720_070 Hb_013394_060--Hb_000720_070 Hb_030827_060 Hb_030827_060 Hb_013394_060--Hb_030827_060 Hb_000538_010 Hb_000538_010 Hb_013394_060--Hb_000538_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0146278 0.0626686 0.0504792 0.0211988 0.154403 0.0460997
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0249231 0.0207337 0

CAGE analysis