Hb_000103_070

Information

Type -
Description -
Location Contig103: 48644-52433
Sequence    

Annotation

kegg
ID tcc:TCM_020667
description CVP2 like 1 isoform 1
nr
ID XP_012069676.1
description PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like [Jatropha curcas]
swissprot
ID Q9LR47
description Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 OS=Arabidopsis thaliana GN=CVP2 PE=1 SV=2
trembl
ID A0A067L831
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02207 PE=4 SV=1
Gene Ontology
ID GO:0004519
description cvp2 like 1 isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01174: 47341-50181 , PASA_asmbl_01175: 52222-52538
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000103_070 0.0 - - PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like [Jatropha curcas]
2 Hb_002600_120 0.1092274653 - - hypothetical protein JCGZ_25652 [Jatropha curcas]
3 Hb_000003_280 0.1103842314 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003893_180 0.1118027139 - - PREDICTED: uncharacterized protein LOC105648771 [Jatropha curcas]
5 Hb_002781_040 0.1118422884 - - conserved hypothetical protein [Ricinus communis]
6 Hb_006002_050 0.1170235385 - - PREDICTED: uncharacterized protein LOC105638083 [Jatropha curcas]
7 Hb_006788_110 0.1188906138 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
8 Hb_010142_060 0.1209034452 - - Blue copper protein precursor, putative [Ricinus communis]
9 Hb_005116_150 0.1228704922 - - PREDICTED: cyclin-P3-1 isoform X2 [Jatropha curcas]
10 Hb_003097_160 0.1228738345 - - PREDICTED: F-box/WD repeat-containing protein sel-10 [Jatropha curcas]
11 Hb_000676_230 0.1232120853 - - PREDICTED: beta-galactosidase 3 [Jatropha curcas]
12 Hb_138585_010 0.1245817097 transcription factor TF Family: NAC PREDICTED: NAC transcription factor ONAC010 [Jatropha curcas]
13 Hb_005542_070 0.1251587883 - - hypothetical protein ZEAMMB73_851878 [Zea mays]
14 Hb_012368_050 0.126336315 - - conserved hypothetical protein [Ricinus communis]
15 Hb_006846_040 0.126663297 - - PREDICTED: uncharacterized protein LOC105648687 [Jatropha curcas]
16 Hb_053264_010 0.1276337042 - - beta glucosidase [Hevea brasiliensis]
17 Hb_001534_140 0.1291822772 transcription factor TF Family: PLATZ PREDICTED: uncharacterized protein LOC105642310 [Jatropha curcas]
18 Hb_000417_210 0.1302205518 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_007760_020 0.1302731633 - - PREDICTED: expansin-A1 [Populus euphratica]
20 Hb_010962_020 0.1306387558 transcription factor TF Family: OFP hypothetical protein RCOM_0815310 [Ricinus communis]

Gene co-expression network

sample Hb_000103_070 Hb_000103_070 Hb_002600_120 Hb_002600_120 Hb_000103_070--Hb_002600_120 Hb_000003_280 Hb_000003_280 Hb_000103_070--Hb_000003_280 Hb_003893_180 Hb_003893_180 Hb_000103_070--Hb_003893_180 Hb_002781_040 Hb_002781_040 Hb_000103_070--Hb_002781_040 Hb_006002_050 Hb_006002_050 Hb_000103_070--Hb_006002_050 Hb_006788_110 Hb_006788_110 Hb_000103_070--Hb_006788_110 Hb_004531_160 Hb_004531_160 Hb_002600_120--Hb_004531_160 Hb_002701_030 Hb_002701_030 Hb_002600_120--Hb_002701_030 Hb_010142_060 Hb_010142_060 Hb_002600_120--Hb_010142_060 Hb_003849_170 Hb_003849_170 Hb_002600_120--Hb_003849_170 Hb_000093_010 Hb_000093_010 Hb_002600_120--Hb_000093_010 Hb_005648_020 Hb_005648_020 Hb_002600_120--Hb_005648_020 Hb_000878_050 Hb_000878_050 Hb_000003_280--Hb_000878_050 Hb_010962_020 Hb_010962_020 Hb_000003_280--Hb_010962_020 Hb_053264_010 Hb_053264_010 Hb_000003_280--Hb_053264_010 Hb_000103_450 Hb_000103_450 Hb_000003_280--Hb_000103_450 Hb_001898_040 Hb_001898_040 Hb_000003_280--Hb_001898_040 Hb_006846_040 Hb_006846_040 Hb_000003_280--Hb_006846_040 Hb_003893_180--Hb_005648_020 Hb_003466_010 Hb_003466_010 Hb_003893_180--Hb_003466_010 Hb_002918_270 Hb_002918_270 Hb_003893_180--Hb_002918_270 Hb_003893_180--Hb_000093_010 Hb_003893_180--Hb_002600_120 Hb_003893_180--Hb_002701_030 Hb_005542_070 Hb_005542_070 Hb_002781_040--Hb_005542_070 Hb_012368_050 Hb_012368_050 Hb_002781_040--Hb_012368_050 Hb_005542_120 Hb_005542_120 Hb_002781_040--Hb_005542_120 Hb_002781_040--Hb_000003_280 Hb_001117_050 Hb_001117_050 Hb_002781_040--Hb_001117_050 Hb_000011_280 Hb_000011_280 Hb_006002_050--Hb_000011_280 Hb_000997_080 Hb_000997_080 Hb_006002_050--Hb_000997_080 Hb_001159_230 Hb_001159_230 Hb_006002_050--Hb_001159_230 Hb_006002_050--Hb_000003_280 Hb_002783_280 Hb_002783_280 Hb_006002_050--Hb_002783_280 Hb_000297_140 Hb_000297_140 Hb_006002_050--Hb_000297_140 Hb_033312_070 Hb_033312_070 Hb_006788_110--Hb_033312_070 Hb_003376_140 Hb_003376_140 Hb_006788_110--Hb_003376_140 Hb_000735_020 Hb_000735_020 Hb_006788_110--Hb_000735_020 Hb_006788_110--Hb_004531_160 Hb_000984_130 Hb_000984_130 Hb_006788_110--Hb_000984_130 Hb_011918_070 Hb_011918_070 Hb_006788_110--Hb_011918_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00947088 0.167319 1.22096 3.86025 0 0.0165726
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.13545 0 0.296266 1.54053

CAGE analysis