Hb_000103_180

Information

Type -
Description -
Location Contig103: 152179-157156
Sequence    

Annotation

kegg
ID rcu:RCOM_0911270
description heat shock protein 70 (HSP70)-interacting protein, putative
nr
ID XP_012069689.1
description PREDICTED: stress-induced-phosphoprotein 1 [Jatropha curcas]
swissprot
ID O16259
description Stress-induced-phosphoprotein 1 OS=Caenorhabditis elegans GN=sti-1 PE=1 SV=1
trembl
ID A0A067KVT9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02220 PE=4 SV=1
Gene Ontology
ID GO:0005829
description stress-induced-phosphoprotein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01196: 152327-157036
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000103_180 0.0 - - PREDICTED: stress-induced-phosphoprotein 1 [Jatropha curcas]
2 Hb_007426_030 0.0522939338 - - PREDICTED: pentatricopeptide repeat-containing protein At2g34400 [Jatropha curcas]
3 Hb_002079_010 0.0600946867 - - hypothetical protein POPTR_0001s01970g [Populus trichocarpa]
4 Hb_004724_200 0.0677661483 - - PREDICTED: WD-40 repeat-containing protein MSI1 [Jatropha curcas]
5 Hb_004109_090 0.0714110615 - - ubiquitin-protein ligase, putative [Ricinus communis]
6 Hb_002811_360 0.0734894376 - - PREDICTED: GDP-mannose 3,5-epimerase 2 [Eucalyptus grandis]
7 Hb_000483_200 0.0739331555 - - Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplast precursor, putative [Ricinus communis]
8 Hb_023344_030 0.0748031866 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
9 Hb_185830_020 0.0751292121 - - ABC transporter family protein [Hevea brasiliensis]
10 Hb_002149_020 0.0756888112 - - PREDICTED: uncharacterized protein LOC105647982 isoform X2 [Jatropha curcas]
11 Hb_002391_300 0.0761870497 - - hypothetical protein PHAVU_002G104100g [Phaseolus vulgaris]
12 Hb_000321_070 0.076731484 - - protein with unknown function [Ricinus communis]
13 Hb_001771_090 0.0768406425 - - PREDICTED: uncharacterized protein LOC105634551 [Jatropha curcas]
14 Hb_007441_120 0.0773962765 - - PREDICTED: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X2 [Jatropha curcas]
15 Hb_033642_010 0.0791110558 - - PREDICTED: protection of telomeres protein 1a-like isoform X2 [Jatropha curcas]
16 Hb_003175_010 0.0808320239 - - PREDICTED: 39S ribosomal protein L4, mitochondrial [Jatropha curcas]
17 Hb_006400_060 0.0812010659 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 31 isoform X1 [Jatropha curcas]
18 Hb_028872_140 0.081554916 - - PREDICTED: uncharacterized protein LOC105644767 isoform X1 [Jatropha curcas]
19 Hb_003195_060 0.0828318161 - - PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Jatropha curcas]
20 Hb_001199_020 0.0828850546 - - hypothetical protein JCGZ_25565 [Jatropha curcas]

Gene co-expression network

sample Hb_000103_180 Hb_000103_180 Hb_007426_030 Hb_007426_030 Hb_000103_180--Hb_007426_030 Hb_002079_010 Hb_002079_010 Hb_000103_180--Hb_002079_010 Hb_004724_200 Hb_004724_200 Hb_000103_180--Hb_004724_200 Hb_004109_090 Hb_004109_090 Hb_000103_180--Hb_004109_090 Hb_002811_360 Hb_002811_360 Hb_000103_180--Hb_002811_360 Hb_000483_200 Hb_000483_200 Hb_000103_180--Hb_000483_200 Hb_001019_060 Hb_001019_060 Hb_007426_030--Hb_001019_060 Hb_000808_230 Hb_000808_230 Hb_007426_030--Hb_000808_230 Hb_007426_030--Hb_000483_200 Hb_007426_030--Hb_002079_010 Hb_006400_060 Hb_006400_060 Hb_007426_030--Hb_006400_060 Hb_002030_030 Hb_002030_030 Hb_002079_010--Hb_002030_030 Hb_002079_010--Hb_006400_060 Hb_063090_010 Hb_063090_010 Hb_002079_010--Hb_063090_010 Hb_000179_020 Hb_000179_020 Hb_002079_010--Hb_000179_020 Hb_004724_200--Hb_002030_030 Hb_004724_200--Hb_002811_360 Hb_001301_200 Hb_001301_200 Hb_004724_200--Hb_001301_200 Hb_048937_040 Hb_048937_040 Hb_004724_200--Hb_048937_040 Hb_004724_200--Hb_004109_090 Hb_001199_020 Hb_001199_020 Hb_004724_200--Hb_001199_020 Hb_003175_010 Hb_003175_010 Hb_004109_090--Hb_003175_010 Hb_003929_160 Hb_003929_160 Hb_004109_090--Hb_003929_160 Hb_000409_020 Hb_000409_020 Hb_004109_090--Hb_000409_020 Hb_001818_090 Hb_001818_090 Hb_004109_090--Hb_001818_090 Hb_005663_060 Hb_005663_060 Hb_004109_090--Hb_005663_060 Hb_039837_010 Hb_039837_010 Hb_002811_360--Hb_039837_010 Hb_028872_140 Hb_028872_140 Hb_002811_360--Hb_028872_140 Hb_001454_210 Hb_001454_210 Hb_002811_360--Hb_001454_210 Hb_000062_240 Hb_000062_240 Hb_002811_360--Hb_000062_240 Hb_002811_360--Hb_001301_200 Hb_000483_200--Hb_006400_060 Hb_006400_030 Hb_006400_030 Hb_000483_200--Hb_006400_030 Hb_003032_040 Hb_003032_040 Hb_000483_200--Hb_003032_040 Hb_002016_110 Hb_002016_110 Hb_000483_200--Hb_002016_110 Hb_001959_210 Hb_001959_210 Hb_000483_200--Hb_001959_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
15.0968 6.70998 6.33788 9.62756 20.9284 28.1772
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.1424 17.591 18.8172 14.5334 7.87174

CAGE analysis