Hb_000103_460

Information

Type -
Description -
Location Contig103: 393256-394441
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa012907mg
description hypothetical protein
nr
ID XP_012069727.1
description PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
swissprot
ID O23320
description Calmodulin-like protein 8 OS=Arabidopsis thaliana GN=CML8 PE=2 SV=1
trembl
ID A0A067L860
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02247 PE=4 SV=1
Gene Ontology
ID GO:0005509
description calmodulin-like protein 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000103_460 0.0 - - PREDICTED: calmodulin-like protein 11 [Jatropha curcas]
2 Hb_006316_090 0.0671767056 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
3 Hb_000358_010 0.0851081604 - - PREDICTED: basic blue protein [Populus euphratica]
4 Hb_001076_010 0.0887396314 transcription factor TF Family: B3 DNA binding protein, putative [Ricinus communis]
5 Hb_001369_550 0.0982584362 - - 21 kDa protein precursor, putative [Ricinus communis]
6 Hb_002874_010 0.1011602819 - - PREDICTED: replication protein A 32 kDa subunit A isoform X1 [Jatropha curcas]
7 Hb_005306_030 0.1061201409 - - PREDICTED: protein IQ-DOMAIN 1 [Jatropha curcas]
8 Hb_001366_380 0.1077463564 - - PREDICTED: pectin acetylesterase 6-like isoform X2 [Jatropha curcas]
9 Hb_007044_260 0.1089844577 - - PREDICTED: uncharacterized protein LOC105638706 isoform X1 [Jatropha curcas]
10 Hb_004316_080 0.1127917178 - - PREDICTED: uncharacterized protein LOC104602212 [Nelumbo nucifera]
11 Hb_000205_180 0.1202292719 - - lipoxygenase, putative [Ricinus communis]
12 Hb_080147_070 0.1211651151 - - Rop5 [Hevea brasiliensis]
13 Hb_004607_020 0.1237727934 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Jatropha curcas]
14 Hb_000260_670 0.1255162551 - - PREDICTED: serine/threonine-protein kinase TIO isoform X1 [Jatropha curcas]
15 Hb_001159_220 0.126290328 - - ESC, putative [Ricinus communis]
16 Hb_003626_020 0.1284465681 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Jatropha curcas]
17 Hb_001649_050 0.1313911884 - - Shaggy-like kinase 13 isoform 1 [Theobroma cacao]
18 Hb_001769_150 0.1319112638 - - PREDICTED: uncharacterized protein LOC105633924 [Jatropha curcas]
19 Hb_002700_030 0.1326568895 - - PREDICTED: serine carboxypeptidase-like 45 [Jatropha curcas]
20 Hb_001284_070 0.1330740579 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000103_460 Hb_000103_460 Hb_006316_090 Hb_006316_090 Hb_000103_460--Hb_006316_090 Hb_000358_010 Hb_000358_010 Hb_000103_460--Hb_000358_010 Hb_001076_010 Hb_001076_010 Hb_000103_460--Hb_001076_010 Hb_001369_550 Hb_001369_550 Hb_000103_460--Hb_001369_550 Hb_002874_010 Hb_002874_010 Hb_000103_460--Hb_002874_010 Hb_005306_030 Hb_005306_030 Hb_000103_460--Hb_005306_030 Hb_006316_090--Hb_000358_010 Hb_006316_090--Hb_001076_010 Hb_006316_090--Hb_001369_550 Hb_001366_380 Hb_001366_380 Hb_006316_090--Hb_001366_380 Hb_004316_080 Hb_004316_080 Hb_006316_090--Hb_004316_080 Hb_007044_260 Hb_007044_260 Hb_000358_010--Hb_007044_260 Hb_000358_010--Hb_001076_010 Hb_000358_010--Hb_002874_010 Hb_001769_150 Hb_001769_150 Hb_000358_010--Hb_001769_150 Hb_001076_010--Hb_002874_010 Hb_004631_040 Hb_004631_040 Hb_001076_010--Hb_004631_040 Hb_000030_080 Hb_000030_080 Hb_001076_010--Hb_000030_080 Hb_080147_070 Hb_080147_070 Hb_001369_550--Hb_080147_070 Hb_000205_180 Hb_000205_180 Hb_001369_550--Hb_000205_180 Hb_000260_670 Hb_000260_670 Hb_001369_550--Hb_000260_670 Hb_002700_030 Hb_002700_030 Hb_001369_550--Hb_002700_030 Hb_001284_070 Hb_001284_070 Hb_001369_550--Hb_001284_070 Hb_002874_010--Hb_004631_040 Hb_002874_010--Hb_007044_260 Hb_000085_360 Hb_000085_360 Hb_002874_010--Hb_000085_360 Hb_119044_040 Hb_119044_040 Hb_002874_010--Hb_119044_040 Hb_001649_050 Hb_001649_050 Hb_005306_030--Hb_001649_050 Hb_005306_030--Hb_001366_380 Hb_011849_030 Hb_011849_030 Hb_005306_030--Hb_011849_030 Hb_008143_050 Hb_008143_050 Hb_005306_030--Hb_008143_050 Hb_004607_020 Hb_004607_020 Hb_005306_030--Hb_004607_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.289728 7.77706 2.46409 0.0888109 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.95621 0.496953

CAGE analysis