Hb_000111_120

Information

Type -
Description -
Location Contig111: 149129-151494
Sequence    

Annotation

kegg
ID rcu:RCOM_1452350
description Aspartic proteinase nepenthesin-1 precursor, putative (EC:3.4.23.3)
nr
ID XP_002513044.1
description Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
swissprot
ID Q766C3
description Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1
trembl
ID B9RG92
description Aspartic proteinase nepenthesin-1, putative OS=Ricinus communis GN=RCOM_1452350 PE=4 SV=1
Gene Ontology
ID GO:0009505
description protein aspartic protease in guard cell 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03382: 149172-151755
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000111_120 0.0 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
2 Hb_000509_090 0.0768869415 - - Reticuline oxidase precursor, putative [Ricinus communis]
3 Hb_001989_040 0.0885190891 - - PREDICTED: neurofilament heavy polypeptide [Jatropha curcas]
4 Hb_004631_100 0.1110891685 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH96 [Jatropha curcas]
5 Hb_010164_020 0.114961381 - - PREDICTED: abscisate beta-glucosyltransferase-like [Jatropha curcas]
6 Hb_000631_100 0.1153728197 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Jatropha curcas]
7 Hb_001776_070 0.1240935774 - - PREDICTED: glucan endo-1,3-beta-glucosidase isoform X2 [Jatropha curcas]
8 Hb_133508_020 0.1254113355 - - PREDICTED: L-ascorbate oxidase homolog [Jatropha curcas]
9 Hb_003875_040 0.1290213371 - - PREDICTED: endoglucanase 11-like [Jatropha curcas]
10 Hb_055147_020 0.1327586026 - - hypothetical protein EUGRSUZ_C03837 [Eucalyptus grandis]
11 Hb_009627_020 0.1361787806 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 34 [Jatropha curcas]
12 Hb_006916_120 0.1369962551 - - PREDICTED: UDP-arabinopyranose mutase 1 [Jatropha curcas]
13 Hb_013358_030 0.1426927638 - - PREDICTED: U-box domain-containing protein 12-like [Jatropha curcas]
14 Hb_087427_010 0.1462440023 - - hypothetical protein PRUPE_ppa007748mg [Prunus persica]
15 Hb_000479_230 0.1462635604 - - hypothetical protein JCGZ_19903 [Jatropha curcas]
16 Hb_002871_050 0.1468146937 transcription factor TF Family: ARF auxin response factor 1 family protein [Populus trichocarpa]
17 Hb_000411_020 0.1477985664 - - cytochrome P450, putative [Ricinus communis]
18 Hb_146901_020 0.1542094286 - - -
19 Hb_003878_020 0.1558651065 - - Epidermis-specific secreted glycoprotein EP1 precursor, putative [Ricinus communis]
20 Hb_055440_010 0.1574195425 - - protein binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000111_120 Hb_000111_120 Hb_000509_090 Hb_000509_090 Hb_000111_120--Hb_000509_090 Hb_001989_040 Hb_001989_040 Hb_000111_120--Hb_001989_040 Hb_004631_100 Hb_004631_100 Hb_000111_120--Hb_004631_100 Hb_010164_020 Hb_010164_020 Hb_000111_120--Hb_010164_020 Hb_000631_100 Hb_000631_100 Hb_000111_120--Hb_000631_100 Hb_001776_070 Hb_001776_070 Hb_000111_120--Hb_001776_070 Hb_000509_090--Hb_001989_040 Hb_000509_090--Hb_004631_100 Hb_000509_090--Hb_010164_020 Hb_133508_020 Hb_133508_020 Hb_000509_090--Hb_133508_020 Hb_002774_180 Hb_002774_180 Hb_000509_090--Hb_002774_180 Hb_008806_040 Hb_008806_040 Hb_001989_040--Hb_008806_040 Hb_001989_040--Hb_002774_180 Hb_001989_040--Hb_010164_020 Hb_001989_040--Hb_004631_100 Hb_002676_110 Hb_002676_110 Hb_004631_100--Hb_002676_110 Hb_033053_020 Hb_033053_020 Hb_004631_100--Hb_033053_020 Hb_000060_080 Hb_000060_080 Hb_004631_100--Hb_000060_080 Hb_002888_100 Hb_002888_100 Hb_004631_100--Hb_002888_100 Hb_004659_100 Hb_004659_100 Hb_004631_100--Hb_004659_100 Hb_010164_020--Hb_001776_070 Hb_000479_230 Hb_000479_230 Hb_010164_020--Hb_000479_230 Hb_002871_050 Hb_002871_050 Hb_010164_020--Hb_002871_050 Hb_011129_020 Hb_011129_020 Hb_010164_020--Hb_011129_020 Hb_000411_020 Hb_000411_020 Hb_000631_100--Hb_000411_020 Hb_189208_050 Hb_189208_050 Hb_000631_100--Hb_189208_050 Hb_024868_010 Hb_024868_010 Hb_000631_100--Hb_024868_010 Hb_087427_010 Hb_087427_010 Hb_000631_100--Hb_087427_010 Hb_002641_140 Hb_002641_140 Hb_000631_100--Hb_002641_140 Hb_008021_040 Hb_008021_040 Hb_000631_100--Hb_008021_040 Hb_000696_030 Hb_000696_030 Hb_001776_070--Hb_000696_030 Hb_027556_060 Hb_027556_060 Hb_001776_070--Hb_027556_060 Hb_005679_110 Hb_005679_110 Hb_001776_070--Hb_005679_110 Hb_001349_020 Hb_001349_020 Hb_001776_070--Hb_001349_020 Hb_005144_080 Hb_005144_080 Hb_001776_070--Hb_005144_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.336834 17.569 30.606 36.3077 0.607046 0.0375647
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 23.2824 1.89197

CAGE analysis