Hb_000115_080

Information

Type -
Description -
Location Contig115: 66175-68420
Sequence    

Annotation

kegg
ID rcu:RCOM_0029900
description hypothetical protein
nr
ID XP_012082096.1
description PREDICTED: uncharacterized protein LOC105642032 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZK6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18332 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04522: 66199-68378
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000115_080 0.0 - - PREDICTED: uncharacterized protein LOC105642032 [Jatropha curcas]
2 Hb_002311_380 0.0986497255 - - PREDICTED: induced during hyphae development protein 1 [Jatropha curcas]
3 Hb_006570_150 0.0993897299 - - PREDICTED: uncharacterized protein LOC105635342 isoform X1 [Jatropha curcas]
4 Hb_003929_170 0.1046968015 - - PREDICTED: novel plant SNARE 13 [Jatropha curcas]
5 Hb_001087_030 0.1062391751 - - PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit [Jatropha curcas]
6 Hb_059480_010 0.1120944894 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
7 Hb_001723_150 0.1144368463 - - S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis]
8 Hb_000494_080 0.1176432022 - - Palmitoyl-protein thioesterase 1 precursor, putative [Ricinus communis]
9 Hb_002445_060 0.1184244423 - - arf gtpase-activating protein, putative [Ricinus communis]
10 Hb_000362_180 0.1190034739 - - Pdap1 [Gossypium arboreum]
11 Hb_000173_310 0.1192456902 - - PREDICTED: uncharacterized protein LOC105631893 isoform X1 [Jatropha curcas]
12 Hb_001141_420 0.1198634682 - - PREDICTED: uncharacterized protein LOC105631978 isoform X1 [Jatropha curcas]
13 Hb_004586_300 0.1202073222 - - PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic [Jatropha curcas]
14 Hb_002893_040 0.1210265002 - - PREDICTED: carbon catabolite repressor protein 4 homolog 6 isoform X1 [Jatropha curcas]
15 Hb_002965_040 0.1233143299 - - drought-responsive family protein [Populus trichocarpa]
16 Hb_003213_010 0.1238592718 - - PREDICTED: uncharacterized protein LOC105641815 [Jatropha curcas]
17 Hb_000603_160 0.1239993532 - - PREDICTED: fatty-acid-binding protein 2 [Jatropha curcas]
18 Hb_124373_010 0.1245147688 - - PREDICTED: BRCA1-A complex subunit BRE isoform X1 [Jatropha curcas]
19 Hb_000207_150 0.1251500216 - - PREDICTED: uncharacterized membrane protein At4g09580 [Jatropha curcas]
20 Hb_002572_020 0.125647473 transcription factor TF Family: SBP hypothetical protein POPTR_0005s28010g [Populus trichocarpa]

Gene co-expression network

sample Hb_000115_080 Hb_000115_080 Hb_002311_380 Hb_002311_380 Hb_000115_080--Hb_002311_380 Hb_006570_150 Hb_006570_150 Hb_000115_080--Hb_006570_150 Hb_003929_170 Hb_003929_170 Hb_000115_080--Hb_003929_170 Hb_001087_030 Hb_001087_030 Hb_000115_080--Hb_001087_030 Hb_059480_010 Hb_059480_010 Hb_000115_080--Hb_059480_010 Hb_001723_150 Hb_001723_150 Hb_000115_080--Hb_001723_150 Hb_000958_080 Hb_000958_080 Hb_002311_380--Hb_000958_080 Hb_000046_570 Hb_000046_570 Hb_002311_380--Hb_000046_570 Hb_005381_020 Hb_005381_020 Hb_002311_380--Hb_005381_020 Hb_001366_090 Hb_001366_090 Hb_002311_380--Hb_001366_090 Hb_002311_380--Hb_003929_170 Hb_000635_040 Hb_000635_040 Hb_002311_380--Hb_000635_040 Hb_002893_040 Hb_002893_040 Hb_006570_150--Hb_002893_040 Hb_002965_040 Hb_002965_040 Hb_006570_150--Hb_002965_040 Hb_001258_100 Hb_001258_100 Hb_006570_150--Hb_001258_100 Hb_009545_090 Hb_009545_090 Hb_006570_150--Hb_009545_090 Hb_002092_120 Hb_002092_120 Hb_006570_150--Hb_002092_120 Hb_003929_170--Hb_001087_030 Hb_003929_170--Hb_000046_570 Hb_000207_150 Hb_000207_150 Hb_003929_170--Hb_000207_150 Hb_000009_400 Hb_000009_400 Hb_003929_170--Hb_000009_400 Hb_000390_250 Hb_000390_250 Hb_003929_170--Hb_000390_250 Hb_000107_230 Hb_000107_230 Hb_003929_170--Hb_000107_230 Hb_004754_050 Hb_004754_050 Hb_001087_030--Hb_004754_050 Hb_001269_330 Hb_001269_330 Hb_001087_030--Hb_001269_330 Hb_000139_530 Hb_000139_530 Hb_001087_030--Hb_000139_530 Hb_000058_130 Hb_000058_130 Hb_001087_030--Hb_000058_130 Hb_000049_020 Hb_000049_020 Hb_001087_030--Hb_000049_020 Hb_084247_010 Hb_084247_010 Hb_059480_010--Hb_084247_010 Hb_000522_150 Hb_000522_150 Hb_059480_010--Hb_000522_150 Hb_002445_060 Hb_002445_060 Hb_059480_010--Hb_002445_060 Hb_059480_010--Hb_003929_170 Hb_059480_010--Hb_000107_230 Hb_004052_040 Hb_004052_040 Hb_059480_010--Hb_004052_040 Hb_003213_010 Hb_003213_010 Hb_001723_150--Hb_003213_010 Hb_000173_310 Hb_000173_310 Hb_001723_150--Hb_000173_310 Hb_000300_260 Hb_000300_260 Hb_001723_150--Hb_000300_260 Hb_002272_050 Hb_002272_050 Hb_001723_150--Hb_002272_050 Hb_003861_060 Hb_003861_060 Hb_001723_150--Hb_003861_060 Hb_018790_020 Hb_018790_020 Hb_001723_150--Hb_018790_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
45.7802 42.9407 66.5801 75.4826 22.7019 27.8741
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
56.5889 29.0525 24.7127 22.8833 28.7187

CAGE analysis