Hb_000120_290

Information

Type -
Description -
Location Contig120: 206189-212233
Sequence    

Annotation

kegg
ID rcu:RCOM_0613760
description taz protein, putative
nr
ID XP_012087546.1
description PREDICTED: N-acylphosphatidylethanolamine synthase isoform X1 [Jatropha curcas]
swissprot
ID Q9ZV87
description N-acylphosphatidylethanolamine synthase OS=Arabidopsis thaliana GN=At1g78690 PE=2 SV=1
trembl
ID B9SRC1
description Taz protein, putative OS=Ricinus communis GN=RCOM_0613760 PE=4 SV=1
Gene Ontology
ID GO:0016740
description n-acylphosphatidylethanolamine synthase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06098: 197994-205465 , PASA_asmbl_06100: 206121-212181
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000120_290 0.0 - - PREDICTED: N-acylphosphatidylethanolamine synthase isoform X1 [Jatropha curcas]
2 Hb_002811_010 0.0836677816 - - cysteine synthase, putative [Ricinus communis]
3 Hb_005731_160 0.0867928542 - - ABC transporter family protein [Hevea brasiliensis]
4 Hb_012627_040 0.0888948439 - - PREDICTED: uncharacterized protein LOC105641988 [Jatropha curcas]
5 Hb_002811_130 0.0975578056 - - Zeta-carotene desaturase, chloroplast precursor, putative [Ricinus communis]
6 Hb_003376_230 0.1010681103 - - PREDICTED: dnaJ protein P58IPK homolog [Jatropha curcas]
7 Hb_000465_190 0.1019074352 - - PREDICTED: E3 ubiquitin-protein ligase HOS1 isoform X2 [Jatropha curcas]
8 Hb_002014_030 0.1046924917 - - hypothetical protein JCGZ_07251 [Jatropha curcas]
9 Hb_006274_030 0.1051119702 - - F-box and wd40 domain protein, putative [Ricinus communis]
10 Hb_001366_180 0.1076743719 - - PREDICTED: translocase of chloroplast 33, chloroplastic-like [Jatropha curcas]
11 Hb_005405_020 0.1090604951 - - PREDICTED: petal death protein isoform X1 [Jatropha curcas]
12 Hb_005253_030 0.1097967263 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
13 Hb_000053_020 0.1100245723 - - F-box and wd40 domain protein, putative [Ricinus communis]
14 Hb_004450_040 0.1110543029 - - PREDICTED: DNA ligase 1 [Jatropha curcas]
15 Hb_012055_030 0.1113816934 - - Protein FRIGIDA, putative [Ricinus communis]
16 Hb_000289_110 0.111527615 - - PREDICTED: cysteine synthase-like [Musa acuminata subsp. malaccensis]
17 Hb_000172_580 0.1117576198 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_002078_340 0.114265957 - - PREDICTED: uncharacterized protein LOC105644820 isoform X2 [Jatropha curcas]
19 Hb_002496_020 0.1189442161 - - DNA binding protein, putative [Ricinus communis]
20 Hb_012150_030 0.119041045 - - PREDICTED: aspartate--tRNA ligase, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000120_290 Hb_000120_290 Hb_002811_010 Hb_002811_010 Hb_000120_290--Hb_002811_010 Hb_005731_160 Hb_005731_160 Hb_000120_290--Hb_005731_160 Hb_012627_040 Hb_012627_040 Hb_000120_290--Hb_012627_040 Hb_002811_130 Hb_002811_130 Hb_000120_290--Hb_002811_130 Hb_003376_230 Hb_003376_230 Hb_000120_290--Hb_003376_230 Hb_000465_190 Hb_000465_190 Hb_000120_290--Hb_000465_190 Hb_002811_010--Hb_005731_160 Hb_055619_010 Hb_055619_010 Hb_002811_010--Hb_055619_010 Hb_003106_190 Hb_003106_190 Hb_002811_010--Hb_003106_190 Hb_000613_110 Hb_000613_110 Hb_002811_010--Hb_000613_110 Hb_000077_150 Hb_000077_150 Hb_002811_010--Hb_000077_150 Hb_005731_160--Hb_000613_110 Hb_002758_010 Hb_002758_010 Hb_005731_160--Hb_002758_010 Hb_000130_320 Hb_000130_320 Hb_005731_160--Hb_000130_320 Hb_005731_160--Hb_055619_010 Hb_000648_040 Hb_000648_040 Hb_005731_160--Hb_000648_040 Hb_012627_040--Hb_005731_160 Hb_012627_040--Hb_002811_010 Hb_000282_080 Hb_000282_080 Hb_012627_040--Hb_000282_080 Hb_012627_040--Hb_002758_010 Hb_012627_040--Hb_000465_190 Hb_000289_110 Hb_000289_110 Hb_002811_130--Hb_000289_110 Hb_011716_130 Hb_011716_130 Hb_002811_130--Hb_011716_130 Hb_002014_030 Hb_002014_030 Hb_002811_130--Hb_002014_030 Hb_005847_060 Hb_005847_060 Hb_002811_130--Hb_005847_060 Hb_006274_030 Hb_006274_030 Hb_002811_130--Hb_006274_030 Hb_000061_210 Hb_000061_210 Hb_002811_130--Hb_000061_210 Hb_000212_440 Hb_000212_440 Hb_003376_230--Hb_000212_440 Hb_011512_110 Hb_011512_110 Hb_003376_230--Hb_011512_110 Hb_003153_010 Hb_003153_010 Hb_003376_230--Hb_003153_010 Hb_000172_580 Hb_000172_580 Hb_003376_230--Hb_000172_580 Hb_001584_200 Hb_001584_200 Hb_003376_230--Hb_001584_200 Hb_005405_020 Hb_005405_020 Hb_003376_230--Hb_005405_020 Hb_005253_030 Hb_005253_030 Hb_000465_190--Hb_005253_030 Hb_000465_190--Hb_002758_010 Hb_005116_050 Hb_005116_050 Hb_000465_190--Hb_005116_050 Hb_002205_230 Hb_002205_230 Hb_000465_190--Hb_002205_230 Hb_000340_100 Hb_000340_100 Hb_000465_190--Hb_000340_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.23302 0.667757 1.28584 1.30576 0.967229 0.905724
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.23955 1.72839 1.04928 1.54552 3.15813

CAGE analysis