Hb_000120_570

Information

Type -
Description -
Location Contig120: 428205-440869
Sequence    

Annotation

kegg
ID tcc:TCM_000035
description Seven transmembrane MLO family protein
nr
ID AHF52924.1
description Mlo protein [Hevea brasiliensis]
swissprot
ID O22757
description MLO-like protein 8 OS=Arabidopsis thaliana GN=MLO8 PE=1 SV=2
trembl
ID W0G8L7
description MLO-like protein OS=Hevea brasiliensis GN=Mlo9 PE=2 SV=1
Gene Ontology
ID GO:0016021
description mlo-like protein 8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06157: 428241-434751
cDNA
(Sanger)
(ID:Location)		 048_A22.ab1: 431711-434746

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000120_570 0.0 - - Mlo protein [Hevea brasiliensis]
2 Hb_001473_080 0.0918779828 - - peroxisomal 3-keto-acyl-CoA thiolase [Hevea brasiliensis]
3 Hb_001922_130 0.0956493749 - - hypothetical protein PHAVU_002G294300g [Phaseolus vulgaris]
4 Hb_001534_070 0.1063654738 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Eucalyptus grandis]
5 Hb_009178_020 0.1064884514 - - PREDICTED: zinc finger protein 622 [Jatropha curcas]
6 Hb_000685_080 0.1117782185 - - protein binding protein, putative [Ricinus communis]
7 Hb_004374_150 0.1156208744 - - PREDICTED: uncharacterized protein LOC105650290 isoform X1 [Jatropha curcas]
8 Hb_003125_060 0.1158994194 - - PREDICTED: snurportin-1 [Jatropha curcas]
9 Hb_010883_080 0.1174320624 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHR1 isoform X1 [Jatropha curcas]
10 Hb_001489_070 0.1188755376 - - PREDICTED: uncharacterized protein LOC105649777 [Jatropha curcas]
11 Hb_006002_030 0.1220615113 - - PREDICTED: F-box/LRR-repeat protein 15 isoform X1 [Jatropha curcas]
12 Hb_004656_060 0.1229770492 - - PREDICTED: uncharacterized protein LOC105634581 [Jatropha curcas]
13 Hb_000016_280 0.1230454672 - - Arginine/serine-rich splicing factor 35 [Theobroma cacao]
14 Hb_006501_060 0.1232578028 - - PREDICTED: lachrymatory-factor synthase-like [Jatropha curcas]
15 Hb_006829_090 0.1263500578 - - PREDICTED: protein MOS2 [Jatropha curcas]
16 Hb_000953_030 0.1265820474 transcription factor TF Family: HSF DNA binding protein, putative [Ricinus communis]
17 Hb_000116_570 0.1281365963 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 5-like [Jatropha curcas]
18 Hb_078477_040 0.1287297243 - - nuclear movement protein nudc, putative [Ricinus communis]
19 Hb_001009_290 0.1302844771 - - PREDICTED: elongator complex protein 3-like [Populus euphratica]
20 Hb_000640_020 0.1313202114 - - PREDICTED: probable dimethyladenosine transferase [Jatropha curcas]

Gene co-expression network

sample Hb_000120_570 Hb_000120_570 Hb_001473_080 Hb_001473_080 Hb_000120_570--Hb_001473_080 Hb_001922_130 Hb_001922_130 Hb_000120_570--Hb_001922_130 Hb_001534_070 Hb_001534_070 Hb_000120_570--Hb_001534_070 Hb_009178_020 Hb_009178_020 Hb_000120_570--Hb_009178_020 Hb_000685_080 Hb_000685_080 Hb_000120_570--Hb_000685_080 Hb_004374_150 Hb_004374_150 Hb_000120_570--Hb_004374_150 Hb_001473_080--Hb_001922_130 Hb_001946_240 Hb_001946_240 Hb_001473_080--Hb_001946_240 Hb_003125_060 Hb_003125_060 Hb_001473_080--Hb_003125_060 Hb_010883_080 Hb_010883_080 Hb_001473_080--Hb_010883_080 Hb_002675_040 Hb_002675_040 Hb_001473_080--Hb_002675_040 Hb_001922_130--Hb_010883_080 Hb_001922_130--Hb_004374_150 Hb_000116_570 Hb_000116_570 Hb_001922_130--Hb_000116_570 Hb_000186_260 Hb_000186_260 Hb_001922_130--Hb_000186_260 Hb_012340_020 Hb_012340_020 Hb_001534_070--Hb_012340_020 Hb_000720_070 Hb_000720_070 Hb_001534_070--Hb_000720_070 Hb_010068_030 Hb_010068_030 Hb_001534_070--Hb_010068_030 Hb_002918_310 Hb_002918_310 Hb_001534_070--Hb_002918_310 Hb_006501_060 Hb_006501_060 Hb_001534_070--Hb_006501_060 Hb_000953_030 Hb_000953_030 Hb_009178_020--Hb_000953_030 Hb_001474_030 Hb_001474_030 Hb_009178_020--Hb_001474_030 Hb_009178_020--Hb_001473_080 Hb_009178_020--Hb_000685_080 Hb_000504_160 Hb_000504_160 Hb_009178_020--Hb_000504_160 Hb_009178_020--Hb_000186_260 Hb_000685_080--Hb_003125_060 Hb_009646_050 Hb_009646_050 Hb_000685_080--Hb_009646_050 Hb_005399_020 Hb_005399_020 Hb_000685_080--Hb_005399_020 Hb_000016_280 Hb_000016_280 Hb_000685_080--Hb_000016_280 Hb_002977_010 Hb_002977_010 Hb_000685_080--Hb_002977_010 Hb_002133_030 Hb_002133_030 Hb_000685_080--Hb_002133_030 Hb_004701_030 Hb_004701_030 Hb_004374_150--Hb_004701_030 Hb_073171_080 Hb_073171_080 Hb_004374_150--Hb_073171_080 Hb_023020_060 Hb_023020_060 Hb_004374_150--Hb_023020_060 Hb_001396_290 Hb_001396_290 Hb_004374_150--Hb_001396_290 Hb_023001_020 Hb_023001_020 Hb_004374_150--Hb_023001_020 Hb_004374_150--Hb_001474_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
46.2876 35.9657 20.722 9.24186 91.3637 49.7734
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.8414 14.4085 10.6461 18.6898 3.20045

CAGE analysis