Hb_000120_690

Information

Type -
Description -
Location Contig120: 549317-551008
Sequence    

Annotation

kegg
ID mtr:MTR_3g043850
description hypothetical protein
nr
ID XP_012080862.1
description PREDICTED: uncharacterized protein LOC105641027 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NUA7
description JHL22C18.10 protein OS=Jatropha curcas GN=JHL22C18.10 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000120_690 0.0 - - PREDICTED: uncharacterized protein LOC105641027 [Jatropha curcas]
2 Hb_001235_090 0.1939501025 - - PREDICTED: uncharacterized protein LOC103449952 [Malus domestica]
3 Hb_004316_090 0.2306447557 - - hypothetical protein JCGZ_21197 [Jatropha curcas]
4 Hb_007975_040 0.2310032083 - - PREDICTED: uncharacterized protein LOC104610918 [Nelumbo nucifera]
5 Hb_004680_030 0.2502202376 - - PREDICTED: uncharacterized protein LOC105795864 [Gossypium raimondii]
6 Hb_012399_010 0.2647187554 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_176472_010 0.2662013729 - - BnaC01g33060D [Brassica napus]
8 Hb_008835_010 0.2794919275 - - PREDICTED: uncharacterized protein LOC105851721 [Cicer arietinum]
9 Hb_006907_090 0.2835647834 - - -
10 Hb_150851_010 0.2853880893 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
11 Hb_000440_030 0.2959824999 - - 50 kDa protein [Hevea brasiliensis]
12 Hb_000545_160 0.2977594426 - - PREDICTED: uncharacterized protein LOC105637052 [Jatropha curcas]
13 Hb_117807_030 0.3057334879 - - Protein MCM10 [Gossypium arboreum]
14 Hb_000638_040 0.3140045821 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-7-like [Glycine max]
15 Hb_003025_070 0.3257785932 - - PREDICTED: uncharacterized protein LOC103419743 [Malus domestica]
16 Hb_000264_220 0.3297318556 - - PREDICTED: uncharacterized protein LOC105649527 [Jatropha curcas]
17 Hb_000705_280 0.3307636051 - - PREDICTED: uncharacterized protein LOC104601116 [Nelumbo nucifera]
18 Hb_001235_080 0.3313081146 - - conserved hypothetical protein [Ricinus communis]
19 Hb_036537_010 0.3355424627 - - ATP binding protein, putative [Ricinus communis]
20 Hb_154340_010 0.3379018506 - - truncated nitrate transporter [Fragaria vesca]

Gene co-expression network

sample Hb_000120_690 Hb_000120_690 Hb_001235_090 Hb_001235_090 Hb_000120_690--Hb_001235_090 Hb_004316_090 Hb_004316_090 Hb_000120_690--Hb_004316_090 Hb_007975_040 Hb_007975_040 Hb_000120_690--Hb_007975_040 Hb_004680_030 Hb_004680_030 Hb_000120_690--Hb_004680_030 Hb_012399_010 Hb_012399_010 Hb_000120_690--Hb_012399_010 Hb_176472_010 Hb_176472_010 Hb_000120_690--Hb_176472_010 Hb_000545_160 Hb_000545_160 Hb_001235_090--Hb_000545_160 Hb_001235_090--Hb_176472_010 Hb_117807_030 Hb_117807_030 Hb_001235_090--Hb_117807_030 Hb_006907_090 Hb_006907_090 Hb_001235_090--Hb_006907_090 Hb_001235_090--Hb_007975_040 Hb_000440_030 Hb_000440_030 Hb_004316_090--Hb_000440_030 Hb_000638_040 Hb_000638_040 Hb_004316_090--Hb_000638_040 Hb_000264_220 Hb_000264_220 Hb_004316_090--Hb_000264_220 Hb_000705_280 Hb_000705_280 Hb_004316_090--Hb_000705_280 Hb_004316_090--Hb_007975_040 Hb_007975_040--Hb_000440_030 Hb_154340_010 Hb_154340_010 Hb_007975_040--Hb_154340_010 Hb_074238_010 Hb_074238_010 Hb_007975_040--Hb_074238_010 Hb_000226_100 Hb_000226_100 Hb_007975_040--Hb_000226_100 Hb_004680_030--Hb_012399_010 Hb_008835_010 Hb_008835_010 Hb_004680_030--Hb_008835_010 Hb_150851_010 Hb_150851_010 Hb_004680_030--Hb_150851_010 Hb_000038_190 Hb_000038_190 Hb_004680_030--Hb_000038_190 Hb_000046_150 Hb_000046_150 Hb_004680_030--Hb_000046_150 Hb_000047_120 Hb_000047_120 Hb_004680_030--Hb_000047_120 Hb_012399_010--Hb_008835_010 Hb_012399_010--Hb_150851_010 Hb_000061_280 Hb_000061_280 Hb_012399_010--Hb_000061_280 Hb_003025_070 Hb_003025_070 Hb_012399_010--Hb_003025_070 Hb_021419_050 Hb_021419_050 Hb_012399_010--Hb_021419_050 Hb_176472_010--Hb_117807_030 Hb_034905_010 Hb_034905_010 Hb_176472_010--Hb_034905_010 Hb_176472_010--Hb_000545_160 Hb_036537_010 Hb_036537_010 Hb_176472_010--Hb_036537_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0288723 0 0.0336068 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.222515 0 0

CAGE analysis