Hb_000120_700

Information

Type -
Description -
Location Contig120: 551845-557464
Sequence    

Annotation

kegg
ID rcu:RCOM_1417700
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_012085830.1
description PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
swissprot
ID O49394
description Cytochrome P450 82C2 OS=Arabidopsis thaliana GN=CYP82C2 PE=2 SV=2
trembl
ID A0A067JR41
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17505 PE=3 SV=1
Gene Ontology
ID GO:0005488
description cytochrome p450 cyp82d47-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06186: 556865-558472 , PASA_asmbl_06187: 557132-557852
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000120_700 0.0 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
2 Hb_022115_030 0.0784435235 - - PREDICTED: umecyanin-like [Jatropha curcas]
3 Hb_023732_020 0.0937326046 - - PREDICTED: fatty acyl-CoA reductase 3-like [Jatropha curcas]
4 Hb_032717_030 0.1036987716 - - PREDICTED: CASP-like protein 1B2 [Jatropha curcas]
5 Hb_115007_010 0.1047834392 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
6 Hb_004448_030 0.1058737515 - - PREDICTED: RING-H2 finger protein ATL40-like [Jatropha curcas]
7 Hb_003073_020 0.1101779625 - - protein binding protein, putative [Ricinus communis]
8 Hb_081224_010 0.1104935928 - - hypothetical protein OsJ_17572 [Oryza sativa Japonica Group]
9 Hb_000483_020 0.1180025991 - - PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Jatropha curcas]
10 Hb_000712_060 0.1185230927 - - PREDICTED: uncharacterized protein LOC105631517 [Jatropha curcas]
11 Hb_005433_050 0.1195663612 - - PREDICTED: uncharacterized protein At1g66480-like [Populus euphratica]
12 Hb_023080_010 0.1214163266 - - PREDICTED: probable serine incorporator [Jatropha curcas]
13 Hb_000679_070 0.1270110739 - - hypothetical protein POPTR_0006s26840g [Populus trichocarpa]
14 Hb_000203_240 0.1294545584 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
15 Hb_002570_020 0.1318797568 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
16 Hb_009780_060 0.1349804772 rubber biosynthesis Gene Name: Geranyl geranyl diphosphate synthase geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
17 Hb_002249_180 0.1357148515 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
18 Hb_135392_010 0.1357823568 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Jatropha curcas]
19 Hb_001379_020 0.1359961204 - - -
20 Hb_004592_020 0.1369742606 - - PREDICTED: non-specific lipid-transfer protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000120_700 Hb_000120_700 Hb_022115_030 Hb_022115_030 Hb_000120_700--Hb_022115_030 Hb_023732_020 Hb_023732_020 Hb_000120_700--Hb_023732_020 Hb_032717_030 Hb_032717_030 Hb_000120_700--Hb_032717_030 Hb_115007_010 Hb_115007_010 Hb_000120_700--Hb_115007_010 Hb_004448_030 Hb_004448_030 Hb_000120_700--Hb_004448_030 Hb_003073_020 Hb_003073_020 Hb_000120_700--Hb_003073_020 Hb_022115_030--Hb_032717_030 Hb_005433_050 Hb_005433_050 Hb_022115_030--Hb_005433_050 Hb_022115_030--Hb_003073_020 Hb_022115_030--Hb_023732_020 Hb_000483_020 Hb_000483_020 Hb_022115_030--Hb_000483_020 Hb_023732_020--Hb_003073_020 Hb_023080_010 Hb_023080_010 Hb_023732_020--Hb_023080_010 Hb_000712_060 Hb_000712_060 Hb_023732_020--Hb_000712_060 Hb_000828_020 Hb_000828_020 Hb_023732_020--Hb_000828_020 Hb_023732_020--Hb_032717_030 Hb_039562_010 Hb_039562_010 Hb_023732_020--Hb_039562_010 Hb_032717_030--Hb_003073_020 Hb_032717_030--Hb_005433_050 Hb_020141_020 Hb_020141_020 Hb_032717_030--Hb_020141_020 Hb_100786_010 Hb_100786_010 Hb_032717_030--Hb_100786_010 Hb_000828_030 Hb_000828_030 Hb_032717_030--Hb_000828_030 Hb_007342_020 Hb_007342_020 Hb_115007_010--Hb_007342_020 Hb_000537_120 Hb_000537_120 Hb_115007_010--Hb_000537_120 Hb_115007_010--Hb_000483_020 Hb_001114_220 Hb_001114_220 Hb_115007_010--Hb_001114_220 Hb_064398_010 Hb_064398_010 Hb_115007_010--Hb_064398_010 Hb_135392_010 Hb_135392_010 Hb_004448_030--Hb_135392_010 Hb_007491_010 Hb_007491_010 Hb_004448_030--Hb_007491_010 Hb_007417_020 Hb_007417_020 Hb_004448_030--Hb_007417_020 Hb_021419_060 Hb_021419_060 Hb_004448_030--Hb_021419_060 Hb_001464_010 Hb_001464_010 Hb_004448_030--Hb_001464_010 Hb_039363_010 Hb_039363_010 Hb_003073_020--Hb_039363_010 Hb_003073_020--Hb_000828_020 Hb_002835_020 Hb_002835_020 Hb_003073_020--Hb_002835_020 Hb_003073_020--Hb_005433_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0280479 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.784961 0.0322382

CAGE analysis