Hb_000120_770

Information

Type -
Description -
Location Contig120: 614090-619605
Sequence    

Annotation

kegg
ID rcu:RCOM_0874340
description hypothetical protein
nr
ID XP_002521719.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S6V0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0874340 PE=4 SV=1
Gene Ontology
ID GO:0071816
description tail-anchored protein insertion receptor wrb-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06201: 615792-616221 , PASA_asmbl_06202: 616517-617458 , PASA_asmbl_06203: 614091-619809 , PASA_asmbl_06204: 614091-619809 , PASA_asmbl_06205: 615571-619767 , PASA_asmbl_06206: 615576-619767
cDNA
(Sanger)
(ID:Location)		 014_O13.ab1: 614094-619726

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000120_770 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001242_080 0.0912570795 - - PREDICTED: UDP-galactose transporter 2-like [Populus euphratica]
3 Hb_001575_060 0.1026223594 - - PREDICTED: 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial-like [Jatropha curcas]
4 Hb_002876_020 0.104773793 - - PREDICTED: maf-like protein DDB_G0281937 isoform X2 [Jatropha curcas]
5 Hb_001865_090 0.1148215822 - - hypothetical protein VITISV_005773 [Vitis vinifera]
6 Hb_003106_100 0.1156055633 - - mannose-1-phosphate guanyltransferase, putative [Ricinus communis]
7 Hb_004257_010 0.1176313563 - - CMP-sialic acid transporter, putative [Ricinus communis]
8 Hb_011249_020 0.1245839378 - - PREDICTED: putative clathrin assembly protein At5g35200 [Jatropha curcas]
9 Hb_000984_240 0.1258471599 - - hypothetical protein JCGZ_15962 [Jatropha curcas]
10 Hb_008642_030 0.1259191801 - - PREDICTED: UMP-CMP kinase 3 isoform X1 [Jatropha curcas]
11 Hb_008147_090 0.1259526837 - - conserved hypothetical protein [Ricinus communis]
12 Hb_006683_070 0.1283759695 - - PREDICTED: uncharacterized protein LOC105631443 [Jatropha curcas]
13 Hb_001892_070 0.1287752217 - - PREDICTED: uncharacterized protein LOC105634071 [Jatropha curcas]
14 Hb_002392_010 0.129260823 - - PREDICTED: apurinic endonuclease-redox protein isoform X4 [Jatropha curcas]
15 Hb_000403_070 0.1294431228 - - PREDICTED: iron-sulfur assembly protein IscA, chloroplastic isoform X1 [Jatropha curcas]
16 Hb_000649_140 0.1296126099 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase setd3 isoform X1 [Jatropha curcas]
17 Hb_001307_030 0.1302564288 - - PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Jatropha curcas]
18 Hb_003050_250 0.1303249839 - - PREDICTED: uncharacterized protein At2g34460, chloroplastic [Jatropha curcas]
19 Hb_001240_010 0.130553589 - - PREDICTED: uncharacterized protein LOC105634101 [Jatropha curcas]
20 Hb_000288_020 0.1318946527 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000120_770 Hb_000120_770 Hb_001242_080 Hb_001242_080 Hb_000120_770--Hb_001242_080 Hb_001575_060 Hb_001575_060 Hb_000120_770--Hb_001575_060 Hb_002876_020 Hb_002876_020 Hb_000120_770--Hb_002876_020 Hb_001865_090 Hb_001865_090 Hb_000120_770--Hb_001865_090 Hb_003106_100 Hb_003106_100 Hb_000120_770--Hb_003106_100 Hb_004257_010 Hb_004257_010 Hb_000120_770--Hb_004257_010 Hb_001242_080--Hb_002876_020 Hb_001892_070 Hb_001892_070 Hb_001242_080--Hb_001892_070 Hb_002392_010 Hb_002392_010 Hb_001242_080--Hb_002392_010 Hb_001242_080--Hb_003106_100 Hb_001242_080--Hb_001575_060 Hb_003050_250 Hb_003050_250 Hb_001575_060--Hb_003050_250 Hb_000403_070 Hb_000403_070 Hb_001575_060--Hb_000403_070 Hb_001728_060 Hb_001728_060 Hb_001575_060--Hb_001728_060 Hb_001240_010 Hb_001240_010 Hb_001575_060--Hb_001240_010 Hb_000107_150 Hb_000107_150 Hb_001575_060--Hb_000107_150 Hb_001575_060--Hb_001892_070 Hb_002876_020--Hb_003106_100 Hb_000649_140 Hb_000649_140 Hb_002876_020--Hb_000649_140 Hb_001019_150 Hb_001019_150 Hb_002876_020--Hb_001019_150 Hb_000428_060 Hb_000428_060 Hb_002876_020--Hb_000428_060 Hb_001353_010 Hb_001353_010 Hb_002876_020--Hb_001353_010 Hb_000029_070 Hb_000029_070 Hb_001865_090--Hb_000029_070 Hb_166574_010 Hb_166574_010 Hb_001865_090--Hb_166574_010 Hb_008147_090 Hb_008147_090 Hb_001865_090--Hb_008147_090 Hb_001754_080 Hb_001754_080 Hb_001865_090--Hb_001754_080 Hb_001489_110 Hb_001489_110 Hb_001865_090--Hb_001489_110 Hb_003106_100--Hb_000649_140 Hb_003106_100--Hb_001019_150 Hb_003106_100--Hb_000428_060 Hb_003106_100--Hb_001353_010 Hb_000465_070 Hb_000465_070 Hb_003106_100--Hb_000465_070 Hb_000329_210 Hb_000329_210 Hb_004257_010--Hb_000329_210 Hb_004257_010--Hb_002392_010 Hb_002184_090 Hb_002184_090 Hb_004257_010--Hb_002184_090 Hb_001195_060 Hb_001195_060 Hb_004257_010--Hb_001195_060 Hb_005167_010 Hb_005167_010 Hb_004257_010--Hb_005167_010 Hb_004257_010--Hb_001892_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.677756 0.708694 4.04592 7.9911 1.72391 3.49648
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.50177 8.33803 5.09879 3.62729 8.11625

CAGE analysis