Hb_000120_810

Information

Type -
Description -
Location Contig120: 648256-651656
Sequence    

Annotation

kegg
ID rcu:RCOM_0873990
description serine/threonine-protein kinase cx32, putative (EC:2.7.10.2)
nr
ID XP_002521714.1
description serine/threonine-protein kinase cx32, putative [Ricinus communis]
swissprot
ID P27450
description Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2
trembl
ID B9S6U5
description Serine/threonine-protein kinase cx32, putative OS=Ricinus communis GN=RCOM_0873990 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable serine threonine-protein kinase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06209: 641373-647301 , PASA_asmbl_06211: 647702-647931 , PASA_asmbl_06212: 648215-648971 , PASA_asmbl_06213: 649426-651315
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000120_810 0.0 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
2 Hb_000704_030 0.0626298055 - - PREDICTED: probable aquaporin SIP2-1 [Cicer arietinum]
3 Hb_026198_010 0.0670440087 - - PREDICTED: uncharacterized protein LOC105634369 isoform X1 [Jatropha curcas]
4 Hb_004079_130 0.0735842593 - - PREDICTED: uncharacterized protein LOC105637708 [Jatropha curcas]
5 Hb_000603_160 0.0852251842 - - PREDICTED: fatty-acid-binding protein 2 [Jatropha curcas]
6 Hb_189216_010 0.0857003498 - - PREDICTED: uncharacterized protein LOC105642236 isoform X1 [Jatropha curcas]
7 Hb_000680_120 0.0868661083 - - PREDICTED: uncharacterized protein LOC105631461 [Jatropha curcas]
8 Hb_000227_390 0.0872560606 - - PREDICTED: vacuole membrane protein KMS1 isoform X2 [Jatropha curcas]
9 Hb_053709_050 0.0893361257 - - PREDICTED: nudix hydrolase 23, chloroplastic isoform X2 [Jatropha curcas]
10 Hb_005563_070 0.0920463395 - - PREDICTED: uncharacterized protein LOC105630108 [Jatropha curcas]
11 Hb_115137_010 0.0931617693 - - PREDICTED: probable protein S-acyltransferase 23 isoform X2 [Jatropha curcas]
12 Hb_000731_200 0.0940962807 - - PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial [Jatropha curcas]
13 Hb_081599_010 0.0941261638 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000012_240 0.0963987676 - - PREDICTED: ferrochelatase-2, chloroplastic [Jatropha curcas]
15 Hb_004531_150 0.0965074922 - - PREDICTED: peroxisome biogenesis protein 2 isoform X1 [Jatropha curcas]
16 Hb_001250_050 0.0975430109 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]
17 Hb_012262_030 0.0987095368 - - PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like [Jatropha curcas]
18 Hb_004994_180 0.0987234855 - - malic enzyme, putative [Ricinus communis]
19 Hb_001191_080 0.1017620494 - - protein with unknown function [Ricinus communis]
20 Hb_023344_150 0.1033223715 - - PREDICTED: uncharacterized protein LOC105644462 [Jatropha curcas]

Gene co-expression network

sample Hb_000120_810 Hb_000120_810 Hb_000704_030 Hb_000704_030 Hb_000120_810--Hb_000704_030 Hb_026198_010 Hb_026198_010 Hb_000120_810--Hb_026198_010 Hb_004079_130 Hb_004079_130 Hb_000120_810--Hb_004079_130 Hb_000603_160 Hb_000603_160 Hb_000120_810--Hb_000603_160 Hb_189216_010 Hb_189216_010 Hb_000120_810--Hb_189216_010 Hb_000680_120 Hb_000680_120 Hb_000120_810--Hb_000680_120 Hb_000704_030--Hb_189216_010 Hb_005563_070 Hb_005563_070 Hb_000704_030--Hb_005563_070 Hb_007839_020 Hb_007839_020 Hb_000704_030--Hb_007839_020 Hb_172426_030 Hb_172426_030 Hb_000704_030--Hb_172426_030 Hb_000704_030--Hb_026198_010 Hb_000926_260 Hb_000926_260 Hb_026198_010--Hb_000926_260 Hb_003687_120 Hb_003687_120 Hb_026198_010--Hb_003687_120 Hb_006637_030 Hb_006637_030 Hb_026198_010--Hb_006637_030 Hb_002693_030 Hb_002693_030 Hb_026198_010--Hb_002693_030 Hb_001140_090 Hb_001140_090 Hb_026198_010--Hb_001140_090 Hb_000227_390 Hb_000227_390 Hb_004079_130--Hb_000227_390 Hb_004079_130--Hb_026198_010 Hb_001482_050 Hb_001482_050 Hb_004079_130--Hb_001482_050 Hb_004079_130--Hb_000704_030 Hb_012092_050 Hb_012092_050 Hb_004079_130--Hb_012092_050 Hb_000603_160--Hb_005563_070 Hb_002572_020 Hb_002572_020 Hb_000603_160--Hb_002572_020 Hb_000603_160--Hb_189216_010 Hb_000365_270 Hb_000365_270 Hb_000603_160--Hb_000365_270 Hb_001141_420 Hb_001141_420 Hb_000603_160--Hb_001141_420 Hb_004607_090 Hb_004607_090 Hb_000603_160--Hb_004607_090 Hb_189216_010--Hb_005563_070 Hb_002471_090 Hb_002471_090 Hb_189216_010--Hb_002471_090 Hb_000778_010 Hb_000778_010 Hb_189216_010--Hb_000778_010 Hb_008748_030 Hb_008748_030 Hb_189216_010--Hb_008748_030 Hb_002272_030 Hb_002272_030 Hb_189216_010--Hb_002272_030 Hb_000137_010 Hb_000137_010 Hb_000680_120--Hb_000137_010 Hb_000230_460 Hb_000230_460 Hb_000680_120--Hb_000230_460 Hb_000258_420 Hb_000258_420 Hb_000680_120--Hb_000258_420 Hb_178968_060 Hb_178968_060 Hb_000680_120--Hb_178968_060 Hb_000788_030 Hb_000788_030 Hb_000680_120--Hb_000788_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.71265 8.17545 10.7267 12.7826 2.2081 3.26795
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.30621 5.80482 3.61924 5.91626 6.6133

CAGE analysis