Hb_000120_980

Information

Type -
Description -
Location Contig120: 747127-749169
Sequence    

Annotation

kegg
ID fve:101304032
description adipocyte plasma membrane-associated protein-like
nr
ID XP_012065360.1
description PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Jatropha curcas]
swissprot
ID Q9CAZ7
description Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis thaliana GN=SSL5 PE=2 SV=1
trembl
ID A0A067LGS5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22367 PE=4 SV=1
Gene Ontology
ID GO:0016844
description protein yls2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06241: 747967-748991
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000120_980 0.0 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Jatropha curcas]
2 Hb_000684_010 0.0495683306 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
3 Hb_005333_100 0.0765158717 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000876_050 0.1061938982 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
5 Hb_005542_110 0.114666237 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01203 [Jatropha curcas]
6 Hb_000086_370 0.1185575755 - - Long-chain-alcohol oxidase FAO2 [Triticum urartu]
7 Hb_002475_100 0.1193265619 - - PREDICTED: uncharacterized protein LOC105645451 [Jatropha curcas]
8 Hb_000255_020 0.1216595981 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
9 Hb_004055_100 0.1231242549 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Jatropha curcas]
10 Hb_001862_060 0.1249467746 - - PREDICTED: uncharacterized protein LOC105639802 isoform X1 [Jatropha curcas]
11 Hb_000221_170 0.1289766677 - - PREDICTED: alcohol dehydrogenase-like 2 [Jatropha curcas]
12 Hb_005489_160 0.1320401392 - - PREDICTED: primary amine oxidase-like [Jatropha curcas]
13 Hb_022108_010 0.1328655917 - - G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Glycine soja]
14 Hb_000976_060 0.1349774214 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
15 Hb_000489_020 0.142821334 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Populus euphratica]
16 Hb_007709_010 0.1442639407 - - -
17 Hb_001838_010 0.1443788175 - - hypothetical protein POPTR_0005s18380g [Populus trichocarpa]
18 Hb_001675_130 0.1446277368 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
19 Hb_182021_010 0.1462510708 - - sucrose transporter 4 [Hevea brasiliensis]
20 Hb_003439_020 0.1478456788 - - PREDICTED: L-type lectin-domain containing receptor kinase IV.1-like [Solanum lycopersicum]

Gene co-expression network

sample Hb_000120_980 Hb_000120_980 Hb_000684_010 Hb_000684_010 Hb_000120_980--Hb_000684_010 Hb_005333_100 Hb_005333_100 Hb_000120_980--Hb_005333_100 Hb_000876_050 Hb_000876_050 Hb_000120_980--Hb_000876_050 Hb_005542_110 Hb_005542_110 Hb_000120_980--Hb_005542_110 Hb_000086_370 Hb_000086_370 Hb_000120_980--Hb_000086_370 Hb_002475_100 Hb_002475_100 Hb_000120_980--Hb_002475_100 Hb_000684_010--Hb_005333_100 Hb_000684_010--Hb_000876_050 Hb_000684_010--Hb_005542_110 Hb_001675_130 Hb_001675_130 Hb_000684_010--Hb_001675_130 Hb_007709_010 Hb_007709_010 Hb_000684_010--Hb_007709_010 Hb_000976_060 Hb_000976_060 Hb_005333_100--Hb_000976_060 Hb_001838_010 Hb_001838_010 Hb_005333_100--Hb_001838_010 Hb_000255_020 Hb_000255_020 Hb_005333_100--Hb_000255_020 Hb_000489_020 Hb_000489_020 Hb_005333_100--Hb_000489_020 Hb_000221_170 Hb_000221_170 Hb_000876_050--Hb_000221_170 Hb_000876_050--Hb_005333_100 Hb_000876_050--Hb_005542_110 Hb_010813_030 Hb_010813_030 Hb_000876_050--Hb_010813_030 Hb_004055_100 Hb_004055_100 Hb_005542_110--Hb_004055_100 Hb_011174_100 Hb_011174_100 Hb_005542_110--Hb_011174_100 Hb_005542_110--Hb_005333_100 Hb_005542_110--Hb_000976_060 Hb_000657_030 Hb_000657_030 Hb_000086_370--Hb_000657_030 Hb_000521_300 Hb_000521_300 Hb_000086_370--Hb_000521_300 Hb_004195_170 Hb_004195_170 Hb_000086_370--Hb_004195_170 Hb_000589_180 Hb_000589_180 Hb_000086_370--Hb_000589_180 Hb_012807_060 Hb_012807_060 Hb_000086_370--Hb_012807_060 Hb_005489_160 Hb_005489_160 Hb_002475_100--Hb_005489_160 Hb_002475_100--Hb_000589_180 Hb_002475_100--Hb_005333_100 Hb_002475_100--Hb_001838_010 Hb_002475_100--Hb_000086_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 16.4588 1.2034 3.44401 0.101813 0.0136296
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0521109 14.3129 4.69818

CAGE analysis