Hb_000123_320

Information

Type -
Description -
Location Contig123: 279852-282308
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012081579.1
description PREDICTED: MADS-box protein FLOWERING LOCUS C-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KCA9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18450 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000123_320 0.0 - - PREDICTED: MADS-box protein FLOWERING LOCUS C-like [Jatropha curcas]
2 Hb_003430_010 0.0015021306 - - xyloglucan endotransglucosylase/hydrolase protein 33 precursor [Populus trichocarpa]
3 Hb_006586_020 0.0073466655 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
4 Hb_003392_020 0.0080730462 - - PREDICTED: uncharacterized protein LOC105650609 [Jatropha curcas]
5 Hb_006011_060 0.0087567797 - - -
6 Hb_101778_020 0.0116382097 transcription factor TF Family: SRS conserved hypothetical protein [Ricinus communis]
7 Hb_008248_010 0.0165989031 - - -
8 Hb_011924_010 0.018530545 - - hypothetical protein, partial [Phaeodactylibacter xiamenensis]
9 Hb_185340_020 0.0244188247 - - -
10 Hb_007259_030 0.0247017058 - - -
11 Hb_068447_010 0.0312298973 - - protein with unknown function [Ricinus communis]
12 Hb_007676_070 0.0349283041 - - PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1-like [Populus euphratica]
13 Hb_000764_060 0.0363933819 - - PREDICTED: uncharacterized protein LOC101491058 [Cicer arietinum]
14 Hb_000756_040 0.0404654337 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
15 Hb_008078_040 0.0418307108 - - PREDICTED: uncharacterized protein LOC105764710 isoform X3 [Gossypium raimondii]
16 Hb_001271_040 0.0430981453 - - hypothetical protein POPTR_0019s039903g, partial [Populus trichocarpa]
17 Hb_005204_030 0.0460150814 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
18 Hb_083270_010 0.0547268229 - - hypothetical protein ARALYDRAFT_896220 [Arabidopsis lyrata subsp. lyrata]
19 Hb_123238_010 0.0555503376 - - hypothetical protein JCGZ_16598 [Jatropha curcas]
20 Hb_001104_260 0.0560581795 - - hypothetical protein JCGZ_23628 [Jatropha curcas]

Gene co-expression network

sample Hb_000123_320 Hb_000123_320 Hb_003430_010 Hb_003430_010 Hb_000123_320--Hb_003430_010 Hb_006586_020 Hb_006586_020 Hb_000123_320--Hb_006586_020 Hb_003392_020 Hb_003392_020 Hb_000123_320--Hb_003392_020 Hb_006011_060 Hb_006011_060 Hb_000123_320--Hb_006011_060 Hb_101778_020 Hb_101778_020 Hb_000123_320--Hb_101778_020 Hb_008248_010 Hb_008248_010 Hb_000123_320--Hb_008248_010 Hb_003430_010--Hb_003392_020 Hb_003430_010--Hb_006011_060 Hb_003430_010--Hb_006586_020 Hb_003430_010--Hb_101778_020 Hb_003430_010--Hb_008248_010 Hb_006586_020--Hb_101778_020 Hb_011924_010 Hb_011924_010 Hb_006586_020--Hb_011924_010 Hb_006586_020--Hb_003392_020 Hb_006586_020--Hb_006011_060 Hb_003392_020--Hb_006011_060 Hb_003392_020--Hb_008248_010 Hb_185340_020 Hb_185340_020 Hb_003392_020--Hb_185340_020 Hb_006011_060--Hb_008248_010 Hb_006011_060--Hb_185340_020 Hb_007259_030 Hb_007259_030 Hb_006011_060--Hb_007259_030 Hb_101778_020--Hb_011924_010 Hb_068447_010 Hb_068447_010 Hb_101778_020--Hb_068447_010 Hb_101778_020--Hb_003392_020 Hb_008248_010--Hb_185340_020 Hb_008248_010--Hb_007259_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.134018 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0280004 0

CAGE analysis