Hb_000127_050

Information

Type -
Description -
Location Contig127: 96887-99140
Sequence    

Annotation

kegg
ID tcc:TCM_007682
description hypothetical protein
nr
ID -
description -
swissprot
ID -
description -
trembl
ID A0A0D9V0C0
description Uncharacterized protein OS=Leersia perrieri PE=4 SV=1
Gene Ontology
ID GO:0004601
description peroxidase 12-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000127_050 0.0 - - -
2 Hb_000743_070 0.0496997134 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
3 Hb_000046_550 0.0572831265 - - PREDICTED: protein ALWAYS EARLY 3 isoform X2 [Jatropha curcas]
4 Hb_003858_050 0.0630320909 - - hypothetical protein PRUPE_ppa021882mg [Prunus persica]
5 Hb_005305_170 0.067746227 - - PREDICTED: probable beta-1,3-galactosyltransferase 8 [Jatropha curcas]
6 Hb_005551_070 0.0835355333 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
7 Hb_160814_010 0.0837138325 - - PREDICTED: probable sulfate transporter 3.5 isoform X1 [Jatropha curcas]
8 Hb_020112_010 0.0876541958 - - acyltransferase, putative [Ricinus communis]
9 Hb_000496_080 0.1021700176 - - Proteinase inhibitor, putative [Ricinus communis]
10 Hb_004330_050 0.1023731488 - - conserved hypothetical protein [Ricinus communis]
11 Hb_010308_010 0.1031138964 - - hypothetical protein JCGZ_22818 [Jatropha curcas]
12 Hb_004785_150 0.1115820807 - - hypothetical protein JCGZ_25207 [Jatropha curcas]
13 Hb_004116_090 0.1144836338 - - -
14 Hb_002759_200 0.1252791463 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Jatropha curcas]
15 Hb_006103_050 0.1261201674 - - -
16 Hb_000329_570 0.1264463046 - - -
17 Hb_001300_060 0.133294557 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
18 Hb_000705_110 0.148512721 - - hypothetical protein POPTR_0005s09220g [Populus trichocarpa]
19 Hb_000002_150 0.1490186416 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001404_060 0.150063808 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000127_050 Hb_000127_050 Hb_000743_070 Hb_000743_070 Hb_000127_050--Hb_000743_070 Hb_000046_550 Hb_000046_550 Hb_000127_050--Hb_000046_550 Hb_003858_050 Hb_003858_050 Hb_000127_050--Hb_003858_050 Hb_005305_170 Hb_005305_170 Hb_000127_050--Hb_005305_170 Hb_005551_070 Hb_005551_070 Hb_000127_050--Hb_005551_070 Hb_160814_010 Hb_160814_010 Hb_000127_050--Hb_160814_010 Hb_020112_010 Hb_020112_010 Hb_000743_070--Hb_020112_010 Hb_004785_150 Hb_004785_150 Hb_000743_070--Hb_004785_150 Hb_000496_080 Hb_000496_080 Hb_000743_070--Hb_000496_080 Hb_010308_010 Hb_010308_010 Hb_000743_070--Hb_010308_010 Hb_004330_050 Hb_004330_050 Hb_000743_070--Hb_004330_050 Hb_000046_550--Hb_005305_170 Hb_000046_550--Hb_003858_050 Hb_000046_550--Hb_005551_070 Hb_002759_200 Hb_002759_200 Hb_000046_550--Hb_002759_200 Hb_000046_550--Hb_000743_070 Hb_003858_050--Hb_005305_170 Hb_003858_050--Hb_002759_200 Hb_004116_090 Hb_004116_090 Hb_003858_050--Hb_004116_090 Hb_003858_050--Hb_005551_070 Hb_005305_170--Hb_005551_070 Hb_005305_170--Hb_002759_200 Hb_006103_050 Hb_006103_050 Hb_005305_170--Hb_006103_050 Hb_005551_070--Hb_006103_050 Hb_005551_070--Hb_002759_200 Hb_000002_150 Hb_000002_150 Hb_160814_010--Hb_000002_150 Hb_000147_010 Hb_000147_010 Hb_160814_010--Hb_000147_010 Hb_160814_010--Hb_000743_070 Hb_000705_110 Hb_000705_110 Hb_160814_010--Hb_000705_110 Hb_160814_010--Hb_004785_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.182965 0.434468 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.257304 0

CAGE analysis