Hb_000130_040

Information

Type -
Description -
Location Contig130: 14864-19637
Sequence    

Annotation

kegg
ID rcu:RCOM_0341320
description glycosyltransferase, putative
nr
ID XP_012078588.1
description PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
swissprot
ID Q9FZ49
description Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase OS=Arabidopsis thaliana GN=ALG9 PE=1 SV=1
trembl
ID A0A067K8T9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14740 PE=4 SV=1
Gene Ontology
ID GO:0004377
description dol-p-man:man c -pp-dol alpha- -mannosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08869: 14856-16523 , PASA_asmbl_08870: 19451-19649
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000130_040 0.0 - - PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
2 Hb_002701_040 0.0926068603 - - PREDICTED: auxin transport protein BIG [Jatropha curcas]
3 Hb_006831_040 0.0975546561 - - PREDICTED: enhancer of mRNA-decapping protein 4-like isoform X1 [Jatropha curcas]
4 Hb_010174_110 0.0977208524 - - hypothetical protein JCGZ_17880 [Jatropha curcas]
5 Hb_004032_380 0.099512723 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Jatropha curcas]
6 Hb_002740_110 0.0998126098 - - PREDICTED: phytochrome A [Jatropha curcas]
7 Hb_002053_080 0.1016525998 - - PREDICTED: pentatricopeptide repeat-containing protein At4g21300 [Jatropha curcas]
8 Hb_000002_010 0.1027453609 - - PREDICTED: uncharacterized protein LOC105641567 [Jatropha curcas]
9 Hb_000028_280 0.1060769932 transcription factor TF Family: NF-X1 PREDICTED: NF-X1-type zinc finger protein NFXL1 [Jatropha curcas]
10 Hb_001529_040 0.1083570827 - - PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Jatropha curcas]
11 Hb_000343_120 0.1085310188 - - PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Jatropha curcas]
12 Hb_001268_350 0.1095860132 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105115846 [Populus euphratica]
13 Hb_002170_050 0.1140704779 - - PREDICTED: pentatricopeptide repeat-containing protein At3g09060 [Jatropha curcas]
14 Hb_003253_040 0.1141061793 - - PREDICTED: uncharacterized protein At5g41620 [Jatropha curcas]
15 Hb_012656_030 0.1141758219 transcription factor TF Family: PHD PREDICTED: protein CHROMATIN REMODELING 4 isoform X1 [Jatropha curcas]
16 Hb_120327_010 0.1142272869 - - PREDICTED: uncharacterized protein LOC105650959 [Jatropha curcas]
17 Hb_004117_310 0.1157261937 - - PREDICTED: uncharacterized protein LOC105648043 [Jatropha curcas]
18 Hb_004994_220 0.1159142611 - - PREDICTED: K(+) efflux antiporter 2, chloroplastic-like isoform X2 [Jatropha curcas]
19 Hb_172632_110 0.1165727934 - - PREDICTED: pumilio homolog 5 [Jatropha curcas]
20 Hb_001341_170 0.1179903567 - - PREDICTED: general transcription factor IIH subunit 2 [Jatropha curcas]

Gene co-expression network

sample Hb_000130_040 Hb_000130_040 Hb_002701_040 Hb_002701_040 Hb_000130_040--Hb_002701_040 Hb_006831_040 Hb_006831_040 Hb_000130_040--Hb_006831_040 Hb_010174_110 Hb_010174_110 Hb_000130_040--Hb_010174_110 Hb_004032_380 Hb_004032_380 Hb_000130_040--Hb_004032_380 Hb_002740_110 Hb_002740_110 Hb_000130_040--Hb_002740_110 Hb_002053_080 Hb_002053_080 Hb_000130_040--Hb_002053_080 Hb_001967_030 Hb_001967_030 Hb_002701_040--Hb_001967_030 Hb_006637_050 Hb_006637_050 Hb_002701_040--Hb_006637_050 Hb_130192_030 Hb_130192_030 Hb_002701_040--Hb_130192_030 Hb_002701_040--Hb_004032_380 Hb_003906_160 Hb_003906_160 Hb_002701_040--Hb_003906_160 Hb_001761_130 Hb_001761_130 Hb_006831_040--Hb_001761_130 Hb_172632_110 Hb_172632_110 Hb_006831_040--Hb_172632_110 Hb_006831_040--Hb_010174_110 Hb_006831_040--Hb_002740_110 Hb_004994_220 Hb_004994_220 Hb_006831_040--Hb_004994_220 Hb_004117_310 Hb_004117_310 Hb_006831_040--Hb_004117_310 Hb_010174_110--Hb_002740_110 Hb_003253_040 Hb_003253_040 Hb_010174_110--Hb_003253_040 Hb_000002_010 Hb_000002_010 Hb_010174_110--Hb_000002_010 Hb_000107_490 Hb_000107_490 Hb_010174_110--Hb_000107_490 Hb_004143_130 Hb_004143_130 Hb_010174_110--Hb_004143_130 Hb_010174_110--Hb_004994_220 Hb_004032_380--Hb_002740_110 Hb_004032_380--Hb_004143_130 Hb_004032_380--Hb_010174_110 Hb_005901_020 Hb_005901_020 Hb_004032_380--Hb_005901_020 Hb_004032_380--Hb_003253_040 Hb_000028_280 Hb_000028_280 Hb_004032_380--Hb_000028_280 Hb_002740_110--Hb_003253_040 Hb_002740_110--Hb_000028_280 Hb_002740_110--Hb_004994_220 Hb_002740_110--Hb_004143_130 Hb_000343_120 Hb_000343_120 Hb_002053_080--Hb_000343_120 Hb_009545_100 Hb_009545_100 Hb_002053_080--Hb_009545_100 Hb_001199_100 Hb_001199_100 Hb_002053_080--Hb_001199_100 Hb_009175_020 Hb_009175_020 Hb_002053_080--Hb_009175_020 Hb_000116_500 Hb_000116_500 Hb_002053_080--Hb_000116_500 Hb_000084_120 Hb_000084_120 Hb_002053_080--Hb_000084_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.66674 8.72427 1.64765 3.38317 10.7963 9.0312
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.57481 7.28192 8.90794 12.1065 6.57277

CAGE analysis