Hb_000130_070

Information

Type -
Description -
Location Contig130: 36353-37615
Sequence    

Annotation

kegg
ID pxb:103932226
description probable mitochondrial chaperone bcs1
nr
ID KDP32535.1
description hypothetical protein JCGZ_14738 [Jatropha curcas]
swissprot
ID Q54DY9
description Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum GN=bcsl1b PE=3 SV=1
trembl
ID A0A067KJU1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14738 PE=4 SV=1
Gene Ontology
ID GO:0000166
description mitochondrial chaperone bcs1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000130_070 0.0 - - hypothetical protein JCGZ_14738 [Jatropha curcas]
2 Hb_000823_010 0.183061157 - - PREDICTED: splicing factor U2af large subunit B isoform X1 [Jatropha curcas]
3 Hb_000505_100 0.2085207985 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100250663 [Vitis vinifera]
4 Hb_004064_060 0.2113406646 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002025_270 0.2122877566 - - PREDICTED: uncharacterized protein At4g15970 isoform X1 [Jatropha curcas]
6 Hb_000940_170 0.2166080737 - - hypothetical protein VITISV_029834 [Vitis vinifera]
7 Hb_000406_060 0.222562971 - - hypothetical protein CICLE_v10000115mg [Citrus clementina]
8 Hb_001631_100 0.2244194059 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
9 Hb_175841_010 0.2254866946 desease resistance Gene Name: NB-ARC PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
10 Hb_000834_230 0.2262693139 - - PREDICTED: ras-related protein RHN1-like [Jatropha curcas]
11 Hb_000022_170 0.2288272081 - - PREDICTED: uncharacterized protein LOC105628473 [Jatropha curcas]
12 Hb_098315_090 0.2298160921 - - Aldehyde dehydrogenase family 6 member B2 [Morus notabilis]
13 Hb_002374_210 0.2301969357 - - PREDICTED: uncharacterized protein LOC105638976 [Jatropha curcas]
14 Hb_000800_110 0.2306799756 - - NAD dehydrogenase, putative [Ricinus communis]
15 Hb_000735_170 0.2318077957 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
16 Hb_002093_050 0.2327254794 - - hypothetical protein POPTR_0008s02940g [Populus trichocarpa]
17 Hb_001322_180 0.2339915649 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 26 [Jatropha curcas]
18 Hb_153257_010 0.2374612829 - - PREDICTED: hippocampus abundant transcript-like protein 1 [Jatropha curcas]
19 Hb_053125_010 0.2377722217 - - PREDICTED: uncharacterized protein LOC104881508 [Vitis vinifera]
20 Hb_000175_120 0.2377840457 - - PREDICTED: pre-mRNA-processing-splicing factor 8 [Jatropha curcas]

Gene co-expression network

sample Hb_000130_070 Hb_000130_070 Hb_000823_010 Hb_000823_010 Hb_000130_070--Hb_000823_010 Hb_000505_100 Hb_000505_100 Hb_000130_070--Hb_000505_100 Hb_004064_060 Hb_004064_060 Hb_000130_070--Hb_004064_060 Hb_002025_270 Hb_002025_270 Hb_000130_070--Hb_002025_270 Hb_000940_170 Hb_000940_170 Hb_000130_070--Hb_000940_170 Hb_000406_060 Hb_000406_060 Hb_000130_070--Hb_000406_060 Hb_000019_170 Hb_000019_170 Hb_000823_010--Hb_000019_170 Hb_153257_010 Hb_153257_010 Hb_000823_010--Hb_153257_010 Hb_000157_070 Hb_000157_070 Hb_000823_010--Hb_000157_070 Hb_001322_180 Hb_001322_180 Hb_000823_010--Hb_001322_180 Hb_003058_200 Hb_003058_200 Hb_000823_010--Hb_003058_200 Hb_000834_230 Hb_000834_230 Hb_000823_010--Hb_000834_230 Hb_003626_050 Hb_003626_050 Hb_000505_100--Hb_003626_050 Hb_006829_100 Hb_006829_100 Hb_000505_100--Hb_006829_100 Hb_000122_080 Hb_000122_080 Hb_000505_100--Hb_000122_080 Hb_000041_060 Hb_000041_060 Hb_000505_100--Hb_000041_060 Hb_000035_010 Hb_000035_010 Hb_000505_100--Hb_000035_010 Hb_000049_250 Hb_000049_250 Hb_000505_100--Hb_000049_250 Hb_083078_010 Hb_083078_010 Hb_004064_060--Hb_083078_010 Hb_143629_020 Hb_143629_020 Hb_004064_060--Hb_143629_020 Hb_000161_240 Hb_000161_240 Hb_004064_060--Hb_000161_240 Hb_001675_100 Hb_001675_100 Hb_004064_060--Hb_001675_100 Hb_000258_090 Hb_000258_090 Hb_004064_060--Hb_000258_090 Hb_007290_070 Hb_007290_070 Hb_004064_060--Hb_007290_070 Hb_005298_020 Hb_005298_020 Hb_002025_270--Hb_005298_020 Hb_001646_010 Hb_001646_010 Hb_002025_270--Hb_001646_010 Hb_005772_030 Hb_005772_030 Hb_002025_270--Hb_005772_030 Hb_024758_020 Hb_024758_020 Hb_002025_270--Hb_024758_020 Hb_002809_160 Hb_002809_160 Hb_002025_270--Hb_002809_160 Hb_003050_150 Hb_003050_150 Hb_002025_270--Hb_003050_150 Hb_005892_020 Hb_005892_020 Hb_000940_170--Hb_005892_020 Hb_000940_170--Hb_003058_200 Hb_000800_110 Hb_000800_110 Hb_000940_170--Hb_000800_110 Hb_021297_020 Hb_021297_020 Hb_000940_170--Hb_021297_020 Hb_169586_010 Hb_169586_010 Hb_000940_170--Hb_169586_010 Hb_002851_010 Hb_002851_010 Hb_000940_170--Hb_002851_010 Hb_000406_060--Hb_006829_100 Hb_002374_210 Hb_002374_210 Hb_000406_060--Hb_002374_210 Hb_001006_340 Hb_001006_340 Hb_000406_060--Hb_001006_340 Hb_000106_020 Hb_000106_020 Hb_000406_060--Hb_000106_020 Hb_003913_110 Hb_003913_110 Hb_000406_060--Hb_003913_110 Hb_002005_080 Hb_002005_080 Hb_000406_060--Hb_002005_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0167241 0.561547 0.577361 0.285822 0.321025 0.573792
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0900847 0.112005 1.26188 0.623171

CAGE analysis