Hb_000134_090

Information

Type -
Description -
Location Contig134: 50427-57435
Sequence    

Annotation

kegg
ID rcu:RCOM_1526580
description chaperone protein DNAj, putative
nr
ID XP_012065513.1
description PREDICTED: chaperone protein dnaJ 1, mitochondrial [Jatropha curcas]
swissprot
ID Q38813
description Chaperone protein dnaJ 1, mitochondrial OS=Arabidopsis thaliana GN=ATJ1 PE=2 SV=2
trembl
ID A0A067LFX4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16717 PE=3 SV=1
Gene Ontology
ID GO:0005524
description chaperone protein dnaj mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_09593: 50414-57764 , PASA_asmbl_09594: 56909-57430
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000134_090 0.0 - - PREDICTED: chaperone protein dnaJ 1, mitochondrial [Jatropha curcas]
2 Hb_002030_030 0.0581926486 - - PREDICTED: GLABRA2 expression modulator [Jatropha curcas]
3 Hb_001862_190 0.0603707904 - - PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1 isoform X2 [Jatropha curcas]
4 Hb_004096_030 0.0679711798 - - PREDICTED: KH domain-containing protein At4g18375-like isoform X1 [Jatropha curcas]
5 Hb_004934_090 0.0700597636 - - hypothetical protein JCGZ_08073 [Jatropha curcas]
6 Hb_006922_100 0.0708212203 - - PREDICTED: uncharacterized protein LOC105645470 isoform X1 [Jatropha curcas]
7 Hb_004724_200 0.0709172978 - - PREDICTED: WD-40 repeat-containing protein MSI1 [Jatropha curcas]
8 Hb_007477_080 0.0748672419 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000120_500 0.075005402 - - PREDICTED: AT-hook motif nuclear-localized protein 10-like [Jatropha curcas]
10 Hb_005306_110 0.0755769409 - - casein kinase, putative [Ricinus communis]
11 Hb_001301_200 0.0757174055 desease resistance Gene Name: NB-ARC Disease resistance protein RPS2, putative [Ricinus communis]
12 Hb_000120_800 0.0765947843 - - PREDICTED: rab proteins geranylgeranyltransferase component A [Jatropha curcas]
13 Hb_010931_080 0.077625784 - - PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Jatropha curcas]
14 Hb_002054_040 0.0776275899 - - PREDICTED: putative clathrin assembly protein At5g35200 [Jatropha curcas]
15 Hb_006816_390 0.0797761447 - - protein phosphatase, putative [Ricinus communis]
16 Hb_000943_070 0.0800631609 - - PREDICTED: uncharacterized protein LOC105635592 isoform X1 [Jatropha curcas]
17 Hb_000661_050 0.080247767 - - PREDICTED: ankyrin repeat domain-containing protein 13C-like [Jatropha curcas]
18 Hb_003362_040 0.0802490947 - - PREDICTED: probable methionine--tRNA ligase [Jatropha curcas]
19 Hb_000889_020 0.0805080437 - - ribosome biogenesis protein brix, putative [Ricinus communis]
20 Hb_005063_040 0.0807987477 - - PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000134_090 Hb_000134_090 Hb_002030_030 Hb_002030_030 Hb_000134_090--Hb_002030_030 Hb_001862_190 Hb_001862_190 Hb_000134_090--Hb_001862_190 Hb_004096_030 Hb_004096_030 Hb_000134_090--Hb_004096_030 Hb_004934_090 Hb_004934_090 Hb_000134_090--Hb_004934_090 Hb_006922_100 Hb_006922_100 Hb_000134_090--Hb_006922_100 Hb_004724_200 Hb_004724_200 Hb_000134_090--Hb_004724_200 Hb_003728_030 Hb_003728_030 Hb_002030_030--Hb_003728_030 Hb_002030_030--Hb_004724_200 Hb_002030_030--Hb_004934_090 Hb_033642_010 Hb_033642_010 Hb_002030_030--Hb_033642_010 Hb_002079_010 Hb_002079_010 Hb_002030_030--Hb_002079_010 Hb_033153_050 Hb_033153_050 Hb_001862_190--Hb_033153_050 Hb_001862_190--Hb_006922_100 Hb_001322_190 Hb_001322_190 Hb_001862_190--Hb_001322_190 Hb_005662_030 Hb_005662_030 Hb_001862_190--Hb_005662_030 Hb_007477_080 Hb_007477_080 Hb_001862_190--Hb_007477_080 Hb_004096_030--Hb_004934_090 Hb_003406_010 Hb_003406_010 Hb_004096_030--Hb_003406_010 Hb_005245_130 Hb_005245_130 Hb_004096_030--Hb_005245_130 Hb_001019_230 Hb_001019_230 Hb_004096_030--Hb_001019_230 Hb_004096_030--Hb_002030_030 Hb_002097_090 Hb_002097_090 Hb_004934_090--Hb_002097_090 Hb_004934_090--Hb_005245_130 Hb_000803_300 Hb_000803_300 Hb_004934_090--Hb_000803_300 Hb_003994_240 Hb_003994_240 Hb_004934_090--Hb_003994_240 Hb_005663_060 Hb_005663_060 Hb_006922_100--Hb_005663_060 Hb_004055_030 Hb_004055_030 Hb_006922_100--Hb_004055_030 Hb_000020_190 Hb_000020_190 Hb_006922_100--Hb_000020_190 Hb_007441_120 Hb_007441_120 Hb_006922_100--Hb_007441_120 Hb_001199_020 Hb_001199_020 Hb_006922_100--Hb_001199_020 Hb_002811_360 Hb_002811_360 Hb_004724_200--Hb_002811_360 Hb_001301_200 Hb_001301_200 Hb_004724_200--Hb_001301_200 Hb_048937_040 Hb_048937_040 Hb_004724_200--Hb_048937_040 Hb_004109_090 Hb_004109_090 Hb_004724_200--Hb_004109_090 Hb_004724_200--Hb_001199_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
75.0626 36.8043 21.2125 28.1671 60.7741 97.2529
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
74.6383 40.1856 57.9266 28.1039 25.7568

CAGE analysis