Hb_000137_030

Information

Type -
Description -
Location Contig137: 48152-51390
Sequence    

Annotation

kegg
ID cit:102620003
description cysteine-rich repeat secretory protein 55-like
nr
ID XP_006484824.1
description PREDICTED: cysteine-rich repeat secretory protein 55-like [Citrus sinensis]
swissprot
ID Q9LV60
description Cysteine-rich repeat secretory protein 55 OS=Arabidopsis thaliana GN=CRRSP55 PE=2 SV=1
trembl
ID A0A067FCH4
description Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036866mg PE=4 SV=1
Gene Ontology
ID GO:0016301
description cysteine-rich repeat secretory protein 55-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000137_030 0.0 - - PREDICTED: cysteine-rich repeat secretory protein 55-like [Citrus sinensis]
2 Hb_189034_010 0.078606461 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_000723_060 0.0917155003 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
4 Hb_050898_010 0.0940130774 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
5 Hb_005892_010 0.1088636886 - - PREDICTED: uncharacterized protein LOC105632168 [Jatropha curcas]
6 Hb_001587_220 0.1138735529 - - receptor protein kinase, putative [Ricinus communis]
7 Hb_183209_020 0.1167851739 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930 isoform X2 [Jatropha curcas]
8 Hb_006615_180 0.1189383083 - - hypothetical protein B456_003G103400 [Gossypium raimondii]
9 Hb_000991_110 0.1193637096 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
10 Hb_002431_090 0.121172689 - - conserved hypothetical protein [Ricinus communis]
11 Hb_006573_060 0.1213240484 - - hypothetical protein [Bruguiera gymnorhiza]
12 Hb_060237_010 0.1239291808 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000101_140 0.1240620824 - - amino acid transporter, putative [Ricinus communis]
14 Hb_005784_020 0.1261269343 - - Protein MKS1, putative [Ricinus communis]
15 Hb_000111_190 0.1263587774 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1 [Jatropha curcas]
16 Hb_131662_010 0.1272515679 - - Insulin-degrading enzyme, putative [Ricinus communis]
17 Hb_000922_290 0.1274636956 - - PREDICTED: probable boron transporter 2 [Jatropha curcas]
18 Hb_010573_040 0.1326084051 - - PREDICTED: zinc-metallopeptidase, peroxisomal isoform X2 [Populus euphratica]
19 Hb_000907_120 0.1332840935 transcription factor TF Family: G2-like PREDICTED: transcription repressor KAN1-like [Populus euphratica]
20 Hb_002325_050 0.1351593192 transcription factor TF Family: MYB MYB transcriptional factor [Populus nigra]

Gene co-expression network

sample Hb_000137_030 Hb_000137_030 Hb_189034_010 Hb_189034_010 Hb_000137_030--Hb_189034_010 Hb_000723_060 Hb_000723_060 Hb_000137_030--Hb_000723_060 Hb_050898_010 Hb_050898_010 Hb_000137_030--Hb_050898_010 Hb_005892_010 Hb_005892_010 Hb_000137_030--Hb_005892_010 Hb_001587_220 Hb_001587_220 Hb_000137_030--Hb_001587_220 Hb_183209_020 Hb_183209_020 Hb_000137_030--Hb_183209_020 Hb_002431_090 Hb_002431_090 Hb_189034_010--Hb_002431_090 Hb_002325_050 Hb_002325_050 Hb_189034_010--Hb_002325_050 Hb_005784_020 Hb_005784_020 Hb_189034_010--Hb_005784_020 Hb_189034_010--Hb_183209_020 Hb_189034_010--Hb_050898_010 Hb_006615_180 Hb_006615_180 Hb_000723_060--Hb_006615_180 Hb_000101_140 Hb_000101_140 Hb_000723_060--Hb_000101_140 Hb_003602_090 Hb_003602_090 Hb_000723_060--Hb_003602_090 Hb_002239_030 Hb_002239_030 Hb_000723_060--Hb_002239_030 Hb_000656_370 Hb_000656_370 Hb_000723_060--Hb_000656_370 Hb_050898_010--Hb_005892_010 Hb_000922_290 Hb_000922_290 Hb_050898_010--Hb_000922_290 Hb_050898_010--Hb_183209_020 Hb_103541_010 Hb_103541_010 Hb_050898_010--Hb_103541_010 Hb_000816_050 Hb_000816_050 Hb_050898_010--Hb_000816_050 Hb_005892_010--Hb_000922_290 Hb_001610_050 Hb_001610_050 Hb_005892_010--Hb_001610_050 Hb_005892_010--Hb_001587_220 Hb_000702_040 Hb_000702_040 Hb_005892_010--Hb_000702_040 Hb_006573_060 Hb_006573_060 Hb_001587_220--Hb_006573_060 Hb_001587_220--Hb_000702_040 Hb_011101_010 Hb_011101_010 Hb_001587_220--Hb_011101_010 Hb_004586_230 Hb_004586_230 Hb_001587_220--Hb_004586_230 Hb_183209_020--Hb_103541_010 Hb_000002_230 Hb_000002_230 Hb_183209_020--Hb_000002_230 Hb_000203_150 Hb_000203_150 Hb_183209_020--Hb_000203_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.04003 0.963406 3.29941 0 0.0181166
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.38539 0.516594

CAGE analysis