Hb_000137_060

Information

Type -
Description -
Location Contig137: 77208-77516
Sequence    

Annotation

kegg
ID rcu:RCOM_1626730
description lipid binding protein, putative
nr
ID KDP45250.1
description hypothetical protein JCGZ_15115 [Jatropha curcas]
swissprot
ID Q8W453
description Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana GN=DIR1 PE=1 SV=1
trembl
ID A0A067LKP2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15115 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10259: 77305-77513
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000137_060 0.0 - - hypothetical protein JCGZ_15115 [Jatropha curcas]
2 Hb_000465_180 0.1020058701 - - PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]
3 Hb_001288_050 0.1283039726 - - -
4 Hb_000567_150 0.1391864515 - - cysteine protease, putative [Ricinus communis]
5 Hb_001571_020 0.1479257077 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Citrus sinensis]
6 Hb_001005_040 0.1482801231 - - -
7 Hb_007130_010 0.1538438866 - - -
8 Hb_135554_010 0.1544844855 - - Insulin-degrading enzyme, putative [Ricinus communis]
9 Hb_025668_020 0.1550949599 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001519_240 0.159824828 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
11 Hb_001963_110 0.1608869039 - - -
12 Hb_009230_020 0.1628097909 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
13 Hb_007676_060 0.1638673192 - - PREDICTED: cellulose synthase-like protein E2 [Pyrus x bretschneideri]
14 Hb_000751_070 0.1653946716 - - -
15 Hb_010490_060 0.1661715901 - - PREDICTED: uncharacterized protein LOC105767021 [Gossypium raimondii]
16 Hb_170878_060 0.1668719695 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
17 Hb_003992_220 0.1710242193 - - s-receptor kinase, putative [Ricinus communis]
18 Hb_001301_010 0.1731325989 - - receptor protein kinase, putative [Ricinus communis]
19 Hb_007382_070 0.1738476497 - - PREDICTED: MAPK-interacting and spindle-stabilizing protein-like [Jatropha curcas]
20 Hb_001597_090 0.1742114522 - - -

Gene co-expression network

sample Hb_000137_060 Hb_000137_060 Hb_000465_180 Hb_000465_180 Hb_000137_060--Hb_000465_180 Hb_001288_050 Hb_001288_050 Hb_000137_060--Hb_001288_050 Hb_000567_150 Hb_000567_150 Hb_000137_060--Hb_000567_150 Hb_001571_020 Hb_001571_020 Hb_000137_060--Hb_001571_020 Hb_001005_040 Hb_001005_040 Hb_000137_060--Hb_001005_040 Hb_007130_010 Hb_007130_010 Hb_000137_060--Hb_007130_010 Hb_000457_130 Hb_000457_130 Hb_000465_180--Hb_000457_130 Hb_007382_070 Hb_007382_070 Hb_000465_180--Hb_007382_070 Hb_135554_010 Hb_135554_010 Hb_000465_180--Hb_135554_010 Hb_001519_240 Hb_001519_240 Hb_000465_180--Hb_001519_240 Hb_000465_180--Hb_001288_050 Hb_001288_050--Hb_000567_150 Hb_001288_050--Hb_001005_040 Hb_000751_070 Hb_000751_070 Hb_001288_050--Hb_000751_070 Hb_001597_090 Hb_001597_090 Hb_001288_050--Hb_001597_090 Hb_001288_050--Hb_001571_020 Hb_002016_130 Hb_002016_130 Hb_001288_050--Hb_002016_130 Hb_000567_150--Hb_000751_070 Hb_110737_010 Hb_110737_010 Hb_000567_150--Hb_110737_010 Hb_000567_150--Hb_001005_040 Hb_001109_170 Hb_001109_170 Hb_000567_150--Hb_001109_170 Hb_060152_010 Hb_060152_010 Hb_000567_150--Hb_060152_010 Hb_008144_010 Hb_008144_010 Hb_001571_020--Hb_008144_010 Hb_001571_020--Hb_001597_090 Hb_001571_020--Hb_001005_040 Hb_001571_020--Hb_000465_180 Hb_009230_020 Hb_009230_020 Hb_001571_020--Hb_009230_020 Hb_001005_040--Hb_002016_130 Hb_029727_010 Hb_029727_010 Hb_001005_040--Hb_029727_010 Hb_000416_010 Hb_000416_010 Hb_001005_040--Hb_000416_010 Hb_001005_040--Hb_001109_170 Hb_007130_010--Hb_000567_150 Hb_004310_170 Hb_004310_170 Hb_007130_010--Hb_004310_170 Hb_007130_010--Hb_000751_070 Hb_007130_010--Hb_000465_180 Hb_007130_010--Hb_001288_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.14606 1.95491 2.13649 2.09037 0.415881 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 9.9885 9.8877

CAGE analysis