Hb_000138_050

Information

Type transcription factor
Description TF Family: HB
Location Contig138: 144339-146309
Sequence    

Annotation

kegg
ID rcu:RCOM_0277680
description Homeobox-leucine zipper protein HAT14, putative
nr
ID XP_002534537.1
description Homeobox-leucine zipper protein HAT14, putative [Ricinus communis]
swissprot
ID P46665
description Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3
trembl
ID B9T8G8
description Homeobox-leucine zipper protein HAT14, putative OS=Ricinus communis GN=RCOM_0277680 PE=4 SV=1
Gene Ontology
ID GO:0005634
description homeobox-leucine zipper protein hox11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10480: 144296-144420 , PASA_asmbl_10481: 145492-145933
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000138_050 0.0 transcription factor TF Family: HB Homeobox-leucine zipper protein HAT14, putative [Ricinus communis]
2 Hb_000261_330 0.1818122654 - - PREDICTED: ER lumen protein-retaining receptor [Amborella trichopoda]
3 Hb_001357_330 0.2030713158 - - PREDICTED: paraspeckle component 1 [Jatropha curcas]
4 Hb_000270_870 0.2080293526 - - PREDICTED: serine/threonine-protein kinase HT1-like [Jatropha curcas]
5 Hb_024836_010 0.2101673485 - - Rho GDP-dissociation inhibitor, putative [Ricinus communis]
6 Hb_074449_010 0.2148482977 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
7 Hb_002986_080 0.2209861112 - - PREDICTED: cyclin-dependent kinase inhibitor 7 [Jatropha curcas]
8 Hb_000842_060 0.2214954353 - - PREDICTED: uncharacterized protein LOC105636760 [Jatropha curcas]
9 Hb_001488_340 0.2239891091 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
10 Hb_028207_020 0.2242554284 - - PREDICTED: uncharacterized protein LOC105650315 isoform X2 [Jatropha curcas]
11 Hb_001141_410 0.2310596603 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
12 Hb_006405_050 0.2320311606 - - PREDICTED: stomatal closure-related actin-binding protein 2-like [Jatropha curcas]
13 Hb_004032_160 0.2341884249 - - PREDICTED: UDP-galactose transporter 2-like [Jatropha curcas]
14 Hb_007919_080 0.2358347342 - - PREDICTED: uncharacterized protein At1g76660 isoform X1 [Jatropha curcas]
15 Hb_007765_070 0.2380319069 - - PREDICTED: mitochondrial uncoupling protein 2 [Jatropha curcas]
16 Hb_000022_200 0.2409965498 - - PREDICTED: uncharacterized protein LOC105638292 [Jatropha curcas]
17 Hb_161478_010 0.241974478 - - ABC transporter family protein [Hevea brasiliensis]
18 Hb_010367_030 0.2431105275 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000300_200 0.2433472656 - - PREDICTED: xylosyltransferase 1 [Jatropha curcas]
20 Hb_160256_010 0.2436488838 - - -

Gene co-expression network

sample Hb_000138_050 Hb_000138_050 Hb_000261_330 Hb_000261_330 Hb_000138_050--Hb_000261_330 Hb_001357_330 Hb_001357_330 Hb_000138_050--Hb_001357_330 Hb_000270_870 Hb_000270_870 Hb_000138_050--Hb_000270_870 Hb_024836_010 Hb_024836_010 Hb_000138_050--Hb_024836_010 Hb_074449_010 Hb_074449_010 Hb_000138_050--Hb_074449_010 Hb_002986_080 Hb_002986_080 Hb_000138_050--Hb_002986_080 Hb_006405_050 Hb_006405_050 Hb_000261_330--Hb_006405_050 Hb_000022_200 Hb_000022_200 Hb_000261_330--Hb_000022_200 Hb_001085_260 Hb_001085_260 Hb_000261_330--Hb_001085_260 Hb_000300_200 Hb_000300_200 Hb_000261_330--Hb_000300_200 Hb_007017_080 Hb_007017_080 Hb_000261_330--Hb_007017_080 Hb_004324_390 Hb_004324_390 Hb_000261_330--Hb_004324_390 Hb_001357_330--Hb_000270_870 Hb_001357_330--Hb_074449_010 Hb_001357_330--Hb_024836_010 Hb_010942_020 Hb_010942_020 Hb_001357_330--Hb_010942_020 Hb_161478_010 Hb_161478_010 Hb_001357_330--Hb_161478_010 Hb_002804_020 Hb_002804_020 Hb_000270_870--Hb_002804_020 Hb_003872_010 Hb_003872_010 Hb_000270_870--Hb_003872_010 Hb_001776_030 Hb_001776_030 Hb_000270_870--Hb_001776_030 Hb_001488_340 Hb_001488_340 Hb_000270_870--Hb_001488_340 Hb_008511_060 Hb_008511_060 Hb_000270_870--Hb_008511_060 Hb_010053_040 Hb_010053_040 Hb_000270_870--Hb_010053_040 Hb_002485_030 Hb_002485_030 Hb_024836_010--Hb_002485_030 Hb_003688_040 Hb_003688_040 Hb_024836_010--Hb_003688_040 Hb_000300_690 Hb_000300_690 Hb_024836_010--Hb_000300_690 Hb_024836_010--Hb_006405_050 Hb_001817_150 Hb_001817_150 Hb_024836_010--Hb_001817_150 Hb_024836_010--Hb_001085_260 Hb_074449_010--Hb_001488_340 Hb_074449_010--Hb_002804_020 Hb_074449_010--Hb_161478_010 Hb_010883_140 Hb_010883_140 Hb_074449_010--Hb_010883_140 Hb_002541_020 Hb_002541_020 Hb_074449_010--Hb_002541_020 Hb_074449_010--Hb_000270_870 Hb_010367_030 Hb_010367_030 Hb_002986_080--Hb_010367_030 Hb_028207_020 Hb_028207_020 Hb_002986_080--Hb_028207_020 Hb_003581_210 Hb_003581_210 Hb_002986_080--Hb_003581_210 Hb_003861_070 Hb_003861_070 Hb_002986_080--Hb_003861_070 Hb_002255_040 Hb_002255_040 Hb_002986_080--Hb_002255_040 Hb_000424_020 Hb_000424_020 Hb_002986_080--Hb_000424_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.1183 0.709845 13.1509 7.32609 1.59486 5.19076
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.40545 1.34927 1.73526 0.327669 2.48371

CAGE analysis