Hb_000139_050

Information

Type -
Description -
Location Contig139: 86145-87740
Sequence    

Annotation

kegg
ID pop:POPTR_0010s09950g
description POPTRDRAFT_658536; putative phosphatase family protein
nr
ID XP_012069607.1
description PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
swissprot
ID Q09893
description Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1
trembl
ID A0A067L7V3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02157 PE=4 SV=1
Gene Ontology
ID GO:0016787
description phosphatase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10615: 86138-87887
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000139_050 0.0 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
2 Hb_036029_020 0.1281287888 - - PREDICTED: patellin-3-like [Jatropha curcas]
3 Hb_029576_070 0.1311506288 - - Mitogen-activated protein kinase kinase kinase, putative [Ricinus communis]
4 Hb_002597_030 0.1326178653 - - -
5 Hb_000010_220 0.1367537528 - - PREDICTED: uncharacterized protein LOC105640277 [Jatropha curcas]
6 Hb_001677_190 0.1396030524 - - ATP-binding cassette transporter, putative [Ricinus communis]
7 Hb_017549_010 0.143741839 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00222 [Jatropha curcas]
8 Hb_001032_080 0.1469102615 - - Ankyrin repeat protein [Medicago truncatula]
9 Hb_001115_100 0.1472418455 - - PREDICTED: uncharacterized protein LOC103714121 [Phoenix dactylifera]
10 Hb_001663_090 0.1500563269 - - ribonuclease t2, putative [Ricinus communis]
11 Hb_170632_010 0.1513879912 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
12 Hb_029622_090 0.1515017888 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
13 Hb_001221_050 0.1540659163 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Jatropha curcas]
14 Hb_000172_230 0.1542525537 - - myo-inositol-1 phosphate synthase [Hevea brasiliensis]
15 Hb_004453_060 0.1554425755 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2 [Jatropha curcas]
16 Hb_011028_040 0.1577500256 - - receptor serine/threonine kinase, putative [Ricinus communis]
17 Hb_150573_010 0.1584137161 transcription factor TF Family: LIM Cysteine and glycine-rich protein, putative [Ricinus communis]
18 Hb_076771_010 0.1587287036 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
19 Hb_003427_020 0.1596643526 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Jatropha curcas]
20 Hb_000163_040 0.1600261953 - - PREDICTED: indole-3-acetic acid-induced protein ARG2-like [Jatropha curcas]

Gene co-expression network

sample Hb_000139_050 Hb_000139_050 Hb_036029_020 Hb_036029_020 Hb_000139_050--Hb_036029_020 Hb_029576_070 Hb_029576_070 Hb_000139_050--Hb_029576_070 Hb_002597_030 Hb_002597_030 Hb_000139_050--Hb_002597_030 Hb_000010_220 Hb_000010_220 Hb_000139_050--Hb_000010_220 Hb_001677_190 Hb_001677_190 Hb_000139_050--Hb_001677_190 Hb_017549_010 Hb_017549_010 Hb_000139_050--Hb_017549_010 Hb_071433_010 Hb_071433_010 Hb_036029_020--Hb_071433_010 Hb_001675_290 Hb_001675_290 Hb_036029_020--Hb_001675_290 Hb_007749_020 Hb_007749_020 Hb_036029_020--Hb_007749_020 Hb_000172_230 Hb_000172_230 Hb_036029_020--Hb_000172_230 Hb_036029_020--Hb_002597_030 Hb_004970_100 Hb_004970_100 Hb_036029_020--Hb_004970_100 Hb_029576_070--Hb_002597_030 Hb_029576_070--Hb_017549_010 Hb_000120_600 Hb_000120_600 Hb_029576_070--Hb_000120_600 Hb_001856_130 Hb_001856_130 Hb_029576_070--Hb_001856_130 Hb_029576_070--Hb_001677_190 Hb_011355_020 Hb_011355_020 Hb_029576_070--Hb_011355_020 Hb_002597_030--Hb_017549_010 Hb_002597_030--Hb_001677_190 Hb_002597_030--Hb_000120_600 Hb_002597_030--Hb_001856_130 Hb_076771_010 Hb_076771_010 Hb_000010_220--Hb_076771_010 Hb_001663_090 Hb_001663_090 Hb_000010_220--Hb_001663_090 Hb_004324_100 Hb_004324_100 Hb_000010_220--Hb_004324_100 Hb_002739_160 Hb_002739_160 Hb_000010_220--Hb_002739_160 Hb_000010_220--Hb_002597_030 Hb_170632_010 Hb_170632_010 Hb_000010_220--Hb_170632_010 Hb_001677_190--Hb_001856_130 Hb_001677_190--Hb_000120_600 Hb_001677_190--Hb_011355_020 Hb_001677_190--Hb_036029_020 Hb_001115_100 Hb_001115_100 Hb_017549_010--Hb_001115_100 Hb_017549_010--Hb_000120_600 Hb_004374_170 Hb_004374_170 Hb_017549_010--Hb_004374_170 Hb_002804_070 Hb_002804_070 Hb_017549_010--Hb_002804_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.09584 54.6592 71.8575 122.83 1.0853 0.811058
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.439334 0.518269 1.50375 4.88846 4.13271

CAGE analysis