Hb_000139_100

Information

Type -
Description -
Location Contig139: 141334-145327
Sequence    

Annotation

kegg
ID rcu:RCOM_0914040
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_012069596.1
description PREDICTED: sugar transport protein 13-like [Jatropha curcas]
swissprot
ID Q94AZ2
description Sugar transport protein 13 OS=Arabidopsis thaliana GN=STP13 PE=1 SV=2
trembl
ID A0A067L6M9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02153 PE=3 SV=1
Gene Ontology
ID GO:0016021
description sugar transport protein 13-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10621: 144171-145325
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000139_100 0.0 - - PREDICTED: sugar transport protein 13-like [Jatropha curcas]
2 Hb_000152_860 0.168627162 - - receptor protein kinase, putative [Ricinus communis]
3 Hb_005496_070 0.1745337775 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
4 Hb_000672_150 0.1878291148 - - Patatin T5 precursor, putative [Ricinus communis]
5 Hb_001511_250 0.2040387313 - - fatty acid desaturase [Manihot esculenta]
6 Hb_000813_160 0.207911843 - - hypothetical protein PRUPE_ppa013181mg [Prunus persica]
7 Hb_001472_130 0.2138695275 - - PREDICTED: uncharacterized protein LOC105645786 [Jatropha curcas]
8 Hb_001959_120 0.2156645103 - - PREDICTED: uncharacterized protein LOC105638487 [Jatropha curcas]
9 Hb_002766_050 0.2206551743 - - PREDICTED: probable carboxylesterase 16 [Jatropha curcas]
10 Hb_119316_020 0.2245427611 - - -
11 Hb_168707_040 0.225389511 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
12 Hb_009189_050 0.2255189373 - - PREDICTED: uncharacterized protein LOC105648080 [Jatropha curcas]
13 Hb_000345_500 0.227111574 - - PREDICTED: peroxisomal adenine nucleotide carrier 1 [Jatropha curcas]
14 Hb_000417_420 0.2286183261 - - PREDICTED: U-box domain-containing protein 17 [Jatropha curcas]
15 Hb_000038_040 0.2298419052 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
16 Hb_001636_060 0.2300494798 - - Putative serine/threonine-protein kinase-like protein CCR3 [Glycine soja]
17 Hb_006043_020 0.2335048315 - - PREDICTED: GEM-like protein 5 [Jatropha curcas]
18 Hb_091889_020 0.2375380449 - - -
19 Hb_001616_110 0.2380456175 - - PREDICTED: RPM1-interacting protein 4 [Jatropha curcas]
20 Hb_004631_010 0.2391689752 - - Early nodulin 20 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000139_100 Hb_000139_100 Hb_000152_860 Hb_000152_860 Hb_000139_100--Hb_000152_860 Hb_005496_070 Hb_005496_070 Hb_000139_100--Hb_005496_070 Hb_000672_150 Hb_000672_150 Hb_000139_100--Hb_000672_150 Hb_001511_250 Hb_001511_250 Hb_000139_100--Hb_001511_250 Hb_000813_160 Hb_000813_160 Hb_000139_100--Hb_000813_160 Hb_001472_130 Hb_001472_130 Hb_000139_100--Hb_001472_130 Hb_000152_860--Hb_001472_130 Hb_031295_010 Hb_031295_010 Hb_000152_860--Hb_031295_010 Hb_000417_420 Hb_000417_420 Hb_000152_860--Hb_000417_420 Hb_000809_080 Hb_000809_080 Hb_000152_860--Hb_000809_080 Hb_000152_860--Hb_005496_070 Hb_005976_040 Hb_005976_040 Hb_005496_070--Hb_005976_040 Hb_006043_020 Hb_006043_020 Hb_005496_070--Hb_006043_020 Hb_000345_500 Hb_000345_500 Hb_005496_070--Hb_000345_500 Hb_018563_020 Hb_018563_020 Hb_005496_070--Hb_018563_020 Hb_002053_030 Hb_002053_030 Hb_005496_070--Hb_002053_030 Hb_001959_120 Hb_001959_120 Hb_000672_150--Hb_001959_120 Hb_001113_030 Hb_001113_030 Hb_000672_150--Hb_001113_030 Hb_168707_040 Hb_168707_040 Hb_000672_150--Hb_168707_040 Hb_000672_150--Hb_001472_130 Hb_000671_170 Hb_000671_170 Hb_000672_150--Hb_000671_170 Hb_008173_030 Hb_008173_030 Hb_000672_150--Hb_008173_030 Hb_119316_020 Hb_119316_020 Hb_001511_250--Hb_119316_020 Hb_001636_060 Hb_001636_060 Hb_001511_250--Hb_001636_060 Hb_005080_020 Hb_005080_020 Hb_001511_250--Hb_005080_020 Hb_031108_010 Hb_031108_010 Hb_001511_250--Hb_031108_010 Hb_000020_070 Hb_000020_070 Hb_001511_250--Hb_000020_070 Hb_000086_620 Hb_000086_620 Hb_001511_250--Hb_000086_620 Hb_091889_020 Hb_091889_020 Hb_000813_160--Hb_091889_020 Hb_011618_100 Hb_011618_100 Hb_000813_160--Hb_011618_100 Hb_000913_080 Hb_000913_080 Hb_000813_160--Hb_000913_080 Hb_009189_050 Hb_009189_050 Hb_000813_160--Hb_009189_050 Hb_014720_050 Hb_014720_050 Hb_000813_160--Hb_014720_050 Hb_001472_130--Hb_000809_080 Hb_000038_040 Hb_000038_040 Hb_001472_130--Hb_000038_040 Hb_000805_230 Hb_000805_230 Hb_001472_130--Hb_000805_230 Hb_006935_010 Hb_006935_010 Hb_001472_130--Hb_006935_010 Hb_000221_060 Hb_000221_060 Hb_001472_130--Hb_000221_060 Hb_001472_130--Hb_000417_420
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.77668 1.24704 1.218 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.382333 1.35364 0.851298 0.436748 1.0386

CAGE analysis