Hb_000140_040

Information

Type -
Description -
Location Contig140: 16515-17888
Sequence    

Annotation

kegg
ID tcc:TCM_031668
description UDP-Glycosyltransferase superfamily protein
nr
ID XP_012092880.1
description PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
swissprot
ID Q9FN26
description UDP-glycosyltransferase 79B6 OS=Arabidopsis thaliana GN=UGT79B6 PE=2 SV=1
trembl
ID A0A061F7Z8
description UDP-Glycosyltransferase superfamily protein OS=Theobroma cacao GN=TCM_031668 PE=4 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 79b6-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_10806: 16386-17908
cDNA
(Sanger)
(ID:Location)		 032_P19.ab1: 17207-17908 , 039_B19.ab1: 17203-17908

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000140_040 0.0 - - PREDICTED: UDP-glycosyltransferase 79B6-like [Jatropha curcas]
2 Hb_180094_010 0.0357417667 - - PREDICTED: uncharacterized protein LOC105628311 [Jatropha curcas]
3 Hb_127349_020 0.0431450684 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
4 Hb_001097_110 0.0451914622 - - gibberellin 20-oxidase, putative [Ricinus communis]
5 Hb_000152_300 0.0455102725 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
6 Hb_046825_010 0.0514794752 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
7 Hb_007534_080 0.0515248167 - - d-3-phosphoglycerate dehydrogenase, putative [Ricinus communis]
8 Hb_003805_110 0.0529807852 - - PREDICTED: laccase-11-like [Jatropha curcas]
9 Hb_081344_010 0.0531081308 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
10 Hb_000433_040 0.0538440132 - - -
11 Hb_010666_020 0.0551898878 - - hypothetical protein JCGZ_04276 [Jatropha curcas]
12 Hb_029584_020 0.0593839134 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004143_080 0.0609211248 - - PREDICTED: protein ECERIFERUM 1 [Jatropha curcas]
14 Hb_003647_070 0.0613623648 - - hypothetical protein POPTR_0006s09430g [Populus trichocarpa]
15 Hb_000363_070 0.062483573 - - conserved hypothetical protein [Ricinus communis]
16 Hb_005474_070 0.0645244414 - - hypothetical protein JCGZ_10579 [Jatropha curcas]
17 Hb_045260_010 0.0652067622 - - PREDICTED: leucine-rich repeat receptor protein kinase EMS1-like [Jatropha curcas]
18 Hb_000815_120 0.0692127637 - - calcium ion binding protein, putative [Ricinus communis]
19 Hb_003058_150 0.0701454848 - - PREDICTED: gibberellin 3-beta-dioxygenase 1-like [Jatropha curcas]
20 Hb_154064_010 0.0708394389 - - PREDICTED: uncharacterized protein LOC105780682 [Gossypium raimondii]

Gene co-expression network

sample Hb_000140_040 Hb_000140_040 Hb_180094_010 Hb_180094_010 Hb_000140_040--Hb_180094_010 Hb_127349_020 Hb_127349_020 Hb_000140_040--Hb_127349_020 Hb_001097_110 Hb_001097_110 Hb_000140_040--Hb_001097_110 Hb_000152_300 Hb_000152_300 Hb_000140_040--Hb_000152_300 Hb_046825_010 Hb_046825_010 Hb_000140_040--Hb_046825_010 Hb_007534_080 Hb_007534_080 Hb_000140_040--Hb_007534_080 Hb_180094_010--Hb_127349_020 Hb_180094_010--Hb_046825_010 Hb_180094_010--Hb_000152_300 Hb_010666_020 Hb_010666_020 Hb_180094_010--Hb_010666_020 Hb_000433_040 Hb_000433_040 Hb_180094_010--Hb_000433_040 Hb_127349_020--Hb_046825_010 Hb_127349_020--Hb_000152_300 Hb_127349_020--Hb_010666_020 Hb_154064_010 Hb_154064_010 Hb_127349_020--Hb_154064_010 Hb_127349_020--Hb_000433_040 Hb_001140_110 Hb_001140_110 Hb_001097_110--Hb_001140_110 Hb_001951_050 Hb_001951_050 Hb_001097_110--Hb_001951_050 Hb_003805_110 Hb_003805_110 Hb_001097_110--Hb_003805_110 Hb_001097_110--Hb_007534_080 Hb_003058_150 Hb_003058_150 Hb_001097_110--Hb_003058_150 Hb_000152_300--Hb_000433_040 Hb_081344_010 Hb_081344_010 Hb_000152_300--Hb_081344_010 Hb_000152_300--Hb_010666_020 Hb_029584_020 Hb_029584_020 Hb_000152_300--Hb_029584_020 Hb_046825_010--Hb_154064_010 Hb_003528_100 Hb_003528_100 Hb_046825_010--Hb_003528_100 Hb_065774_010 Hb_065774_010 Hb_046825_010--Hb_065774_010 Hb_005474_070 Hb_005474_070 Hb_007534_080--Hb_005474_070 Hb_003647_070 Hb_003647_070 Hb_007534_080--Hb_003647_070 Hb_007534_080--Hb_003058_150 Hb_007534_080--Hb_003805_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.458125 78.8686 120.265 0 0.0771994
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0271976 0 0.0108701 465.216

CAGE analysis