Hb_000141_010

Information

Type -
Description -
Location Contig141: 12105-14357
Sequence    

Annotation

kegg
ID rcu:RCOM_1061840
description hypothetical protein
nr
ID XP_012069959.1
description PREDICTED: uncharacterized protein LOC105632253 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KUP4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03388 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11076: 11711-11890
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000141_010 0.0 - - PREDICTED: uncharacterized protein LOC105632253 [Jatropha curcas]
2 Hb_000527_070 0.0931865632 transcription factor TF Family: SNF2 PREDICTED: uncharacterized protein LOC105649495 [Jatropha curcas]
3 Hb_002218_070 0.1488325693 - - PREDICTED: myosin-binding protein 1 [Jatropha curcas]
4 Hb_001410_010 0.1529444991 transcription factor TF Family: RWP-RK PREDICTED: protein NLP7-like [Jatropha curcas]
5 Hb_082683_010 0.1541905166 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]
6 Hb_002291_020 0.1564001913 - - PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X1 [Jatropha curcas]
7 Hb_001091_020 0.1566192483 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
8 Hb_002217_070 0.1570675233 - - PREDICTED: uncharacterized protein LOC105643596 [Jatropha curcas]
9 Hb_000527_140 0.1645023315 transcription factor TF Family: GRAS Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
10 Hb_000816_020 0.1662858283 desease resistance Gene Name: NB-ARC unnamed protein product [Coffea canephora]
11 Hb_001373_010 0.1673055056 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
12 Hb_073973_020 0.1707473357 - - PREDICTED: DIS3-like exonuclease 2 [Jatropha curcas]
13 Hb_149515_010 0.1709047043 - - multidrug resistance-associated protein 2, 6 (mrp2, 6), abc-transoprter, putative [Ricinus communis]
14 Hb_011853_010 0.1710418256 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
15 Hb_001268_300 0.1762924063 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000067_030 0.1780851559 - - hypothetical protein JCGZ_04985 [Jatropha curcas]
17 Hb_003106_210 0.1804665816 - - PREDICTED: UDP-glycosyltransferase 74B1-like [Jatropha curcas]
18 Hb_042202_020 0.1805558209 - - Eukaryotic release factor 1-3 isoform 1 [Theobroma cacao]
19 Hb_002420_010 0.1808945558 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
20 Hb_000032_020 0.1835682028 - - Centromeric protein E, putative [Ricinus communis]

Gene co-expression network

sample Hb_000141_010 Hb_000141_010 Hb_000527_070 Hb_000527_070 Hb_000141_010--Hb_000527_070 Hb_002218_070 Hb_002218_070 Hb_000141_010--Hb_002218_070 Hb_001410_010 Hb_001410_010 Hb_000141_010--Hb_001410_010 Hb_082683_010 Hb_082683_010 Hb_000141_010--Hb_082683_010 Hb_002291_020 Hb_002291_020 Hb_000141_010--Hb_002291_020 Hb_001091_020 Hb_001091_020 Hb_000141_010--Hb_001091_020 Hb_000527_140 Hb_000527_140 Hb_000527_070--Hb_000527_140 Hb_114684_010 Hb_114684_010 Hb_000527_070--Hb_114684_010 Hb_000847_020 Hb_000847_020 Hb_000527_070--Hb_000847_020 Hb_000345_340 Hb_000345_340 Hb_000527_070--Hb_000345_340 Hb_073973_020 Hb_073973_020 Hb_000527_070--Hb_073973_020 Hb_002218_070--Hb_001410_010 Hb_117840_010 Hb_117840_010 Hb_002218_070--Hb_117840_010 Hb_000236_110 Hb_000236_110 Hb_002218_070--Hb_000236_110 Hb_003106_210 Hb_003106_210 Hb_002218_070--Hb_003106_210 Hb_002600_010 Hb_002600_010 Hb_002218_070--Hb_002600_010 Hb_008175_030 Hb_008175_030 Hb_002218_070--Hb_008175_030 Hb_057079_020 Hb_057079_020 Hb_001410_010--Hb_057079_020 Hb_011310_200 Hb_011310_200 Hb_001410_010--Hb_011310_200 Hb_001410_010--Hb_000236_110 Hb_002928_180 Hb_002928_180 Hb_001410_010--Hb_002928_180 Hb_036568_010 Hb_036568_010 Hb_001410_010--Hb_036568_010 Hb_002420_010 Hb_002420_010 Hb_082683_010--Hb_002420_010 Hb_001268_300 Hb_001268_300 Hb_082683_010--Hb_001268_300 Hb_000816_020 Hb_000816_020 Hb_082683_010--Hb_000816_020 Hb_082683_010--Hb_000527_140 Hb_002003_040 Hb_002003_040 Hb_082683_010--Hb_002003_040 Hb_001677_230 Hb_001677_230 Hb_082683_010--Hb_001677_230 Hb_000649_180 Hb_000649_180 Hb_002291_020--Hb_000649_180 Hb_007919_040 Hb_007919_040 Hb_002291_020--Hb_007919_040 Hb_149515_010 Hb_149515_010 Hb_002291_020--Hb_149515_010 Hb_012565_040 Hb_012565_040 Hb_002291_020--Hb_012565_040 Hb_002291_020--Hb_000527_070 Hb_117168_010 Hb_117168_010 Hb_001091_020--Hb_117168_010 Hb_000313_370 Hb_000313_370 Hb_001091_020--Hb_000313_370 Hb_005880_010 Hb_005880_010 Hb_001091_020--Hb_005880_010 Hb_001091_020--Hb_002218_070 Hb_002660_040 Hb_002660_040 Hb_001091_020--Hb_002660_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0913169 4.07603 1.04752 1.36471 0.303898 0.316632
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0791644 0.21802 0.82935 4.22092 2.70756

CAGE analysis