Hb_000146_110

Information

Type -
Description -
Location Contig146: 228463-229513
Sequence    

Annotation

kegg
ID vvi:100247052
description GT3; cinnamate beta-D-glucosyltransferase-like
nr
ID ABH03018.1
description resveratrol/hydroxycinnamic acid O-glucosyltransferase [Vitis labrusca]
swissprot
ID Q9MB73
description Limonoid UDP-glucosyltransferase OS=Citrus unshiu PE=2 SV=1
trembl
ID Q0PI14
description Resveratrol/hydroxycinnamic acid O-glucosyltransferase OS=Vitis labrusca PE=2 SV=1
Gene Ontology
ID GO:0016758
description limonoid udp-glucosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_11868: 228514-228952 , PASA_asmbl_11869: 228953-229057
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000146_110 0.0 - - resveratrol/hydroxycinnamic acid O-glucosyltransferase [Vitis labrusca]
2 Hb_000003_620 0.0587718399 - - PREDICTED: ABC transporter G family member 29-like [Jatropha curcas]
3 Hb_009778_030 0.0610917365 transcription factor TF Family: TCP PREDICTED: transcription factor TCP23-like [Populus euphratica]
4 Hb_002890_060 0.0905107589 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA1 [Eucalyptus grandis]
5 Hb_000111_130 0.0914312314 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
6 Hb_000123_310 0.0933945634 - - PREDICTED: aquaporin TIP1-3 [Jatropha curcas]
7 Hb_007371_020 0.0954584125 - - PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X1 [Jatropha curcas]
8 Hb_010962_030 0.1006892651 - - kinase, putative [Ricinus communis]
9 Hb_010620_020 0.1083896799 - - receptor protein kinase, putative [Ricinus communis]
10 Hb_129399_010 0.1093708968 - - cytochrome P450, putative [Ricinus communis]
11 Hb_001274_040 0.1136293697 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
12 Hb_001363_030 0.1139894687 - - PREDICTED: UDP-glycosyltransferase 74F2-like [Populus euphratica]
13 Hb_004712_140 0.1156675583 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
14 Hb_010327_010 0.1197959344 - - calcium ion binding protein, putative [Ricinus communis]
15 Hb_041290_030 0.120343504 - - PREDICTED: uncharacterized protein LOC105640874 [Jatropha curcas]
16 Hb_005054_300 0.121162807 - - aquaporin [Hevea brasiliensis]
17 Hb_002783_300 0.1237960679 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
18 Hb_000521_290 0.1244839317 - - hypothetical protein POPTR_0001s23530g [Populus trichocarpa]
19 Hb_108055_010 0.1260791633 - - UDP-glucosyltransferase, putative [Ricinus communis]
20 Hb_000465_380 0.126449181 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000146_110 Hb_000146_110 Hb_000003_620 Hb_000003_620 Hb_000146_110--Hb_000003_620 Hb_009778_030 Hb_009778_030 Hb_000146_110--Hb_009778_030 Hb_002890_060 Hb_002890_060 Hb_000146_110--Hb_002890_060 Hb_000111_130 Hb_000111_130 Hb_000146_110--Hb_000111_130 Hb_000123_310 Hb_000123_310 Hb_000146_110--Hb_000123_310 Hb_007371_020 Hb_007371_020 Hb_000146_110--Hb_007371_020 Hb_000003_620--Hb_009778_030 Hb_000003_620--Hb_000111_130 Hb_001363_030 Hb_001363_030 Hb_000003_620--Hb_001363_030 Hb_000003_620--Hb_007371_020 Hb_001365_040 Hb_001365_040 Hb_000003_620--Hb_001365_040 Hb_009778_030--Hb_002890_060 Hb_009778_030--Hb_000111_130 Hb_009778_030--Hb_000123_310 Hb_009778_030--Hb_001363_030 Hb_002890_060--Hb_000111_130 Hb_001274_040 Hb_001274_040 Hb_002890_060--Hb_001274_040 Hb_002890_060--Hb_000123_310 Hb_002890_060--Hb_000003_620 Hb_000111_130--Hb_001274_040 Hb_000111_130--Hb_001365_040 Hb_005054_300 Hb_005054_300 Hb_000123_310--Hb_005054_300 Hb_041290_030 Hb_041290_030 Hb_000123_310--Hb_041290_030 Hb_021596_070 Hb_021596_070 Hb_000123_310--Hb_021596_070 Hb_010962_030 Hb_010962_030 Hb_007371_020--Hb_010962_030 Hb_007371_020--Hb_021596_070 Hb_007371_020--Hb_009778_030 Hb_010327_010 Hb_010327_010 Hb_007371_020--Hb_010327_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0247051 61.8146 3.68148 5.66894 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0566761 0.133715 0 13.5821 7.6074

CAGE analysis