Hb_000147_010

Information

Type -
Description -
Location Contig147: 47099-53210
Sequence    

Annotation

kegg
ID pop:POPTR_0001s28870g
description POPTRDRAFT_173649; hypothetical protein
nr
ID XP_012078544.1
description PREDICTED: UDP-glycosyltransferase 87A1-like [Jatropha curcas]
swissprot
ID O64732
description UDP-glycosyltransferase 87A1 OS=Arabidopsis thaliana GN=UGT87A1 PE=2 SV=1
trembl
ID B9GH64
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s28870g PE=4 SV=2
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase 87a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000147_010 0.0 - - PREDICTED: UDP-glycosyltransferase 87A1-like [Jatropha curcas]
2 Hb_000925_120 0.0735732391 - - Spotted leaf protein, putative [Ricinus communis]
3 Hb_160814_010 0.0827907899 - - PREDICTED: probable sulfate transporter 3.5 isoform X1 [Jatropha curcas]
4 Hb_000002_150 0.0846197861 - - conserved hypothetical protein [Ricinus communis]
5 Hb_116783_010 0.1061201791 - - hypothetical protein POPTR_0011s16190g [Populus trichocarpa]
6 Hb_003020_340 0.1133045567 - - PREDICTED: uncharacterized protein LOC105631327 [Jatropha curcas]
7 Hb_000705_110 0.1136058445 - - hypothetical protein POPTR_0005s09220g [Populus trichocarpa]
8 Hb_004785_150 0.1342229219 - - hypothetical protein JCGZ_25207 [Jatropha curcas]
9 Hb_001242_020 0.1437726845 - - hypothetical protein JCGZ_08334 [Jatropha curcas]
10 Hb_001633_120 0.1447346516 - - PREDICTED: uncharacterized protein LOC105630199 [Jatropha curcas]
11 Hb_000743_070 0.1483070362 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
12 Hb_055154_010 0.1485260857 - - PREDICTED: laccase-7 [Jatropha curcas]
13 Hb_002437_010 0.1539383893 - - PREDICTED: uncharacterized protein LOC105123193 [Populus euphratica]
14 Hb_000127_050 0.1608074086 - - -
15 Hb_014865_010 0.163069824 - - hypothetical protein PRUPE_ppa017366mg, partial [Prunus persica]
16 Hb_000364_130 0.1667617112 - - unnamed protein product [Vitis vinifera]
17 Hb_003226_050 0.1675361819 - - Pectinesterase-3 precursor, putative [Ricinus communis]
18 Hb_003177_100 0.1741681772 - - PREDICTED: auxin-induced protein 6B [Jatropha curcas]
19 Hb_001863_280 0.1763359123 - - PREDICTED: protein EXORDIUM-like 2 [Jatropha curcas]
20 Hb_009780_110 0.1783522019 - - PREDICTED: protein RSI-1 [Cicer arietinum]

Gene co-expression network

sample Hb_000147_010 Hb_000147_010 Hb_000925_120 Hb_000925_120 Hb_000147_010--Hb_000925_120 Hb_160814_010 Hb_160814_010 Hb_000147_010--Hb_160814_010 Hb_000002_150 Hb_000002_150 Hb_000147_010--Hb_000002_150 Hb_116783_010 Hb_116783_010 Hb_000147_010--Hb_116783_010 Hb_003020_340 Hb_003020_340 Hb_000147_010--Hb_003020_340 Hb_000705_110 Hb_000705_110 Hb_000147_010--Hb_000705_110 Hb_000925_120--Hb_116783_010 Hb_055154_010 Hb_055154_010 Hb_000925_120--Hb_055154_010 Hb_000925_120--Hb_003020_340 Hb_000925_120--Hb_000002_150 Hb_002809_020 Hb_002809_020 Hb_000925_120--Hb_002809_020 Hb_160814_010--Hb_000002_150 Hb_000127_050 Hb_000127_050 Hb_160814_010--Hb_000127_050 Hb_000743_070 Hb_000743_070 Hb_160814_010--Hb_000743_070 Hb_160814_010--Hb_000705_110 Hb_004785_150 Hb_004785_150 Hb_160814_010--Hb_004785_150 Hb_000002_150--Hb_003020_340 Hb_005356_030 Hb_005356_030 Hb_000002_150--Hb_005356_030 Hb_103452_010 Hb_103452_010 Hb_000002_150--Hb_103452_010 Hb_116783_010--Hb_055154_010 Hb_090510_010 Hb_090510_010 Hb_116783_010--Hb_090510_010 Hb_116783_010--Hb_002809_020 Hb_001242_020 Hb_001242_020 Hb_116783_010--Hb_001242_020 Hb_003020_340--Hb_055154_010 Hb_003020_340--Hb_005356_030 Hb_003480_010 Hb_003480_010 Hb_003020_340--Hb_003480_010 Hb_001633_120 Hb_001633_120 Hb_000705_110--Hb_001633_120 Hb_000705_110--Hb_004785_150 Hb_000705_110--Hb_000743_070 Hb_014865_010 Hb_014865_010 Hb_000705_110--Hb_014865_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0809967 0.192293 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.250075 0

CAGE analysis