Hb_000149_120

Information

Type -
Description -
Location Contig149: 201371-203734
Sequence    

Annotation

kegg
ID pop:POPTR_0016s00290g
description hypothetical protein
nr
ID XP_012082202.1
description PREDICTED: uncharacterized protein LOC105642119 isoform X2 [Jatropha curcas]
swissprot
ID Q55129
description Uncharacterized protein sll0400 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0400 PE=3 SV=1
trembl
ID A0A067JYQ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16411 PE=4 SV=1
Gene Ontology
ID GO:0009507
description PREDICTED: uncharacterized protein LOC105642119 isoform X2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000149_120 0.0 - - PREDICTED: uncharacterized protein LOC105642119 isoform X2 [Jatropha curcas]
2 Hb_006120_020 0.088016651 - - -
3 Hb_040963_010 0.1035006074 - - PREDICTED: polyneuridine-aldehyde esterase-like [Populus euphratica]
4 Hb_002928_220 0.1054536968 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
5 Hb_007382_070 0.1201777318 - - PREDICTED: MAPK-interacting and spindle-stabilizing protein-like [Jatropha curcas]
6 Hb_024570_020 0.1322449967 transcription factor TF Family: MYB-related PREDICTED: transcription factor RAX2-like [Populus euphratica]
7 Hb_006970_100 0.1369282224 - - UDP-glucosyltransferase, putative [Ricinus communis]
8 Hb_005618_110 0.1376590613 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
9 Hb_001538_040 0.1433055758 - - PREDICTED: uncharacterized protein LOC104228304 [Nicotiana sylvestris]
10 Hb_060822_010 0.1518822387 - - -
11 Hb_114025_010 0.1532521276 - - hypothetical protein POPTR_0008s13520g [Populus trichocarpa]
12 Hb_002542_090 0.16185349 - - Potassium transporter, putative [Ricinus communis]
13 Hb_006651_010 0.1662922601 - - PREDICTED: protein disulfide isomerase-like 1-4-like [Citrus sinensis]
14 Hb_008080_050 0.167645472 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_001675_230 0.1677788829 - - scab resistance family protein [Populus trichocarpa]
16 Hb_000291_320 0.174202754 - - Protein MLO, putative [Ricinus communis]
17 Hb_000254_150 0.1759874968 - - PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
18 Hb_006569_110 0.176984728 - - conserved hypothetical protein [Ricinus communis]
19 Hb_009486_100 0.1778344197 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
20 Hb_148121_030 0.1807022973 - - PREDICTED: zinc-finger homeodomain protein 14 [Gossypium raimondii]

Gene co-expression network

sample Hb_000149_120 Hb_000149_120 Hb_006120_020 Hb_006120_020 Hb_000149_120--Hb_006120_020 Hb_040963_010 Hb_040963_010 Hb_000149_120--Hb_040963_010 Hb_002928_220 Hb_002928_220 Hb_000149_120--Hb_002928_220 Hb_007382_070 Hb_007382_070 Hb_000149_120--Hb_007382_070 Hb_024570_020 Hb_024570_020 Hb_000149_120--Hb_024570_020 Hb_006970_100 Hb_006970_100 Hb_000149_120--Hb_006970_100 Hb_114025_010 Hb_114025_010 Hb_006120_020--Hb_114025_010 Hb_001675_230 Hb_001675_230 Hb_006120_020--Hb_001675_230 Hb_006120_020--Hb_002928_220 Hb_005618_110 Hb_005618_110 Hb_006120_020--Hb_005618_110 Hb_006120_020--Hb_006970_100 Hb_148121_030 Hb_148121_030 Hb_040963_010--Hb_148121_030 Hb_040963_010--Hb_005618_110 Hb_001388_020 Hb_001388_020 Hb_040963_010--Hb_001388_020 Hb_040963_010--Hb_002928_220 Hb_002740_170 Hb_002740_170 Hb_040963_010--Hb_002740_170 Hb_002928_220--Hb_006970_100 Hb_006569_110 Hb_006569_110 Hb_002928_220--Hb_006569_110 Hb_009486_100 Hb_009486_100 Hb_002928_220--Hb_009486_100 Hb_002542_090 Hb_002542_090 Hb_002928_220--Hb_002542_090 Hb_006938_010 Hb_006938_010 Hb_002928_220--Hb_006938_010 Hb_007382_070--Hb_006970_100 Hb_000465_180 Hb_000465_180 Hb_007382_070--Hb_000465_180 Hb_029576_080 Hb_029576_080 Hb_007382_070--Hb_029576_080 Hb_007382_070--Hb_002928_220 Hb_006651_010 Hb_006651_010 Hb_007382_070--Hb_006651_010 Hb_060822_010 Hb_060822_010 Hb_024570_020--Hb_060822_010 Hb_001538_040 Hb_001538_040 Hb_024570_020--Hb_001538_040 Hb_024570_020--Hb_114025_010 Hb_024570_020--Hb_006120_020 Hb_002811_330 Hb_002811_330 Hb_024570_020--Hb_002811_330 Hb_006970_100--Hb_006651_010 Hb_003060_080 Hb_003060_080 Hb_006970_100--Hb_003060_080 Hb_033622_020 Hb_033622_020 Hb_006970_100--Hb_033622_020 Hb_006970_100--Hb_006569_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.371949 0.269367 0.0125861 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.33272 0.560351

CAGE analysis