Hb_000152_250

Information

Type -
Description -
Location Contig152: 201368-202774
Sequence    

Annotation

kegg
ID pop:POPTR_0012s14310g
description POPTRDRAFT_422934; hypothetical protein
nr
ID XP_012090387.1
description PREDICTED: uncharacterized protein LOC105648569 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JEQ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26212 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000152_250 0.0 - - PREDICTED: uncharacterized protein LOC105648569 [Jatropha curcas]
2 Hb_015473_010 0.0683631735 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
3 Hb_000907_120 0.0773380606 transcription factor TF Family: G2-like PREDICTED: transcription repressor KAN1-like [Populus euphratica]
4 Hb_002735_010 0.0848998447 - - PREDICTED: CLAVATA3/ESR (CLE)-related protein 44 [Prunus mume]
5 Hb_003439_090 0.0885799418 - - kinase, putative [Ricinus communis]
6 Hb_000521_210 0.0987282357 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
7 Hb_006020_010 0.1076462978 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
8 Hb_001823_070 0.113641767 - - PREDICTED: uncharacterized protein LOC105637371 [Jatropha curcas]
9 Hb_006364_020 0.1144293781 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Jatropha curcas]
10 Hb_000586_100 0.1196952079 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002110_210 0.1224304975 - - purine transporter, putative [Ricinus communis]
12 Hb_073171_010 0.1245936714 - - PREDICTED: ABC transporter G family member 29-like [Jatropha curcas]
13 Hb_005147_020 0.1259553758 - - PREDICTED: uncharacterized protein LOC105629671 [Jatropha curcas]
14 Hb_000101_140 0.1277402984 - - amino acid transporter, putative [Ricinus communis]
15 Hb_000111_190 0.1314119133 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1 [Jatropha curcas]
16 Hb_000856_240 0.1328108348 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
17 Hb_003430_020 0.1329982161 - - PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
18 Hb_134017_010 0.1334549827 - - kinase, putative [Ricinus communis]
19 Hb_003439_020 0.1339264528 - - PREDICTED: L-type lectin-domain containing receptor kinase IV.1-like [Solanum lycopersicum]
20 Hb_000045_180 0.1346916146 - - aquaporin PIP1 [Hevea brasiliensis]

Gene co-expression network

sample Hb_000152_250 Hb_000152_250 Hb_015473_010 Hb_015473_010 Hb_000152_250--Hb_015473_010 Hb_000907_120 Hb_000907_120 Hb_000152_250--Hb_000907_120 Hb_002735_010 Hb_002735_010 Hb_000152_250--Hb_002735_010 Hb_003439_090 Hb_003439_090 Hb_000152_250--Hb_003439_090 Hb_000521_210 Hb_000521_210 Hb_000152_250--Hb_000521_210 Hb_006020_010 Hb_006020_010 Hb_000152_250--Hb_006020_010 Hb_015473_010--Hb_002735_010 Hb_015473_010--Hb_000521_210 Hb_002110_210 Hb_002110_210 Hb_015473_010--Hb_002110_210 Hb_015473_010--Hb_003439_090 Hb_001823_070 Hb_001823_070 Hb_015473_010--Hb_001823_070 Hb_008406_020 Hb_008406_020 Hb_000907_120--Hb_008406_020 Hb_000907_120--Hb_000521_210 Hb_000907_120--Hb_006020_010 Hb_006364_020 Hb_006364_020 Hb_000907_120--Hb_006364_020 Hb_000111_190 Hb_000111_190 Hb_000907_120--Hb_000111_190 Hb_002735_010--Hb_002110_210 Hb_140848_010 Hb_140848_010 Hb_002735_010--Hb_140848_010 Hb_000127_070 Hb_000127_070 Hb_002735_010--Hb_000127_070 Hb_002241_020 Hb_002241_020 Hb_002735_010--Hb_002241_020 Hb_000586_100 Hb_000586_100 Hb_003439_090--Hb_000586_100 Hb_013914_020 Hb_013914_020 Hb_003439_090--Hb_013914_020 Hb_134017_010 Hb_134017_010 Hb_003439_090--Hb_134017_010 Hb_000045_180 Hb_000045_180 Hb_003439_090--Hb_000045_180 Hb_003430_020 Hb_003430_020 Hb_003439_090--Hb_003430_020 Hb_000407_080 Hb_000407_080 Hb_003439_090--Hb_000407_080 Hb_000101_140 Hb_000101_140 Hb_000521_210--Hb_000101_140 Hb_084127_010 Hb_084127_010 Hb_000521_210--Hb_084127_010 Hb_000856_240 Hb_000856_240 Hb_000521_210--Hb_000856_240 Hb_000579_220 Hb_000579_220 Hb_000521_210--Hb_000579_220 Hb_006020_010--Hb_000586_100 Hb_006020_010--Hb_003439_090 Hb_006020_010--Hb_000407_080 Hb_006020_010--Hb_006364_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 11.4758 1.16567 7.3362 0.0147833 0.0149538
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0264562 0 6.46881 0.827904

CAGE analysis