Hb_000152_370

Information

Type -
Description -
Location Contig152: 320879-323125
Sequence    

Annotation

kegg
ID rcu:RCOM_1499120
description hypothetical protein
nr
ID XP_012090399.1
description PREDICTED: uncharacterized protein LOC105648579 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JQV5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26221 PE=4 SV=1
Gene Ontology
ID GO:0003676
description isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000152_370 0.0 - - PREDICTED: uncharacterized protein LOC105648579 isoform X1 [Jatropha curcas]
2 Hb_028207_060 0.131586206 - - PREDICTED: uncharacterized protein LOC105639235 [Jatropha curcas]
3 Hb_007445_010 0.131606826 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
4 Hb_000429_050 0.1478638271 - - PREDICTED: serine/threonine-protein kinase Nek6 isoform X2 [Jatropha curcas]
5 Hb_001511_240 0.1487138939 - - PREDICTED: uncharacterized protein LOC105133574 isoform X3 [Populus euphratica]
6 Hb_012940_030 0.1498490651 - - PREDICTED: uncharacterized protein LOC105639708 [Jatropha curcas]
7 Hb_008749_040 0.1585005797 - - PREDICTED: formin-like protein 20 [Populus euphratica]
8 Hb_001842_010 0.1596973987 - - serine/threonine protein kinase, putative [Ricinus communis]
9 Hb_001946_180 0.1624463235 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001369_710 0.1631243847 - - PREDICTED: uncharacterized protein LOC105648579 isoform X1 [Jatropha curcas]
11 Hb_059480_010 0.1632633743 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
12 Hb_008406_180 0.1643359856 - - RING/U-box superfamily protein isoform 2 [Theobroma cacao]
13 Hb_011344_160 0.1665127375 - - PREDICTED: primary amine oxidase [Jatropha curcas]
14 Hb_005463_110 0.16751258 - - PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Jatropha curcas]
15 Hb_001951_150 0.1677765097 - - PREDICTED: uncharacterized protein LOC105649758 [Jatropha curcas]
16 Hb_062226_120 0.1699743641 transcription factor TF Family: LIM zinc ion binding protein, putative [Ricinus communis]
17 Hb_006658_020 0.1704998468 - - PREDICTED: uncharacterized protein LOC105633529 [Jatropha curcas]
18 Hb_000230_130 0.1707551316 transcription factor TF Family: SBP PREDICTED: squamosa promoter-binding-like protein 7 isoform X1 [Jatropha curcas]
19 Hb_000071_120 0.173061373 - - PREDICTED: fasciclin-like arabinogalactan protein 4 [Jatropha curcas]
20 Hb_001016_050 0.1748477867 - - drought-inducible protein [Manihot esculenta]

Gene co-expression network

sample Hb_000152_370 Hb_000152_370 Hb_028207_060 Hb_028207_060 Hb_000152_370--Hb_028207_060 Hb_007445_010 Hb_007445_010 Hb_000152_370--Hb_007445_010 Hb_000429_050 Hb_000429_050 Hb_000152_370--Hb_000429_050 Hb_001511_240 Hb_001511_240 Hb_000152_370--Hb_001511_240 Hb_012940_030 Hb_012940_030 Hb_000152_370--Hb_012940_030 Hb_008749_040 Hb_008749_040 Hb_000152_370--Hb_008749_040 Hb_003998_010 Hb_003998_010 Hb_028207_060--Hb_003998_010 Hb_028207_060--Hb_007445_010 Hb_001662_050 Hb_001662_050 Hb_028207_060--Hb_001662_050 Hb_001488_220 Hb_001488_220 Hb_028207_060--Hb_001488_220 Hb_000413_070 Hb_000413_070 Hb_028207_060--Hb_000413_070 Hb_007445_010--Hb_001511_240 Hb_007445_010--Hb_001488_220 Hb_102698_010 Hb_102698_010 Hb_007445_010--Hb_102698_010 Hb_001442_060 Hb_001442_060 Hb_007445_010--Hb_001442_060 Hb_000099_030 Hb_000099_030 Hb_007445_010--Hb_000099_030 Hb_000238_030 Hb_000238_030 Hb_007445_010--Hb_000238_030 Hb_000359_090 Hb_000359_090 Hb_000429_050--Hb_000359_090 Hb_012651_010 Hb_012651_010 Hb_000429_050--Hb_012651_010 Hb_000028_600 Hb_000028_600 Hb_000429_050--Hb_000028_600 Hb_002781_030 Hb_002781_030 Hb_000429_050--Hb_002781_030 Hb_001014_210 Hb_001014_210 Hb_000429_050--Hb_001014_210 Hb_000258_240 Hb_000258_240 Hb_000429_050--Hb_000258_240 Hb_006373_010 Hb_006373_010 Hb_001511_240--Hb_006373_010 Hb_009193_120 Hb_009193_120 Hb_001511_240--Hb_009193_120 Hb_007083_030 Hb_007083_030 Hb_001511_240--Hb_007083_030 Hb_007336_010 Hb_007336_010 Hb_001511_240--Hb_007336_010 Hb_004452_110 Hb_004452_110 Hb_001511_240--Hb_004452_110 Hb_000115_080 Hb_000115_080 Hb_012940_030--Hb_000115_080 Hb_002732_030 Hb_002732_030 Hb_012940_030--Hb_002732_030 Hb_005276_060 Hb_005276_060 Hb_012940_030--Hb_005276_060 Hb_059480_010 Hb_059480_010 Hb_012940_030--Hb_059480_010 Hb_001087_030 Hb_001087_030 Hb_012940_030--Hb_001087_030 Hb_011671_250 Hb_011671_250 Hb_008749_040--Hb_011671_250 Hb_000731_170 Hb_000731_170 Hb_008749_040--Hb_000731_170 Hb_002307_270 Hb_002307_270 Hb_008749_040--Hb_002307_270 Hb_009780_030 Hb_009780_030 Hb_008749_040--Hb_009780_030 Hb_000836_380 Hb_000836_380 Hb_008749_040--Hb_000836_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.65592 3.92779 1.79338 10.6305 1.52241 3.61382
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.12105 2.71761 2.13872 3.43883 5.79484

CAGE analysis