Hb_000152_440

Information

Type -
Description -
Location Contig152: 385775-387022
Sequence    

Annotation

kegg
ID cit:102618868
description UDP-glucuronate 4-epimerase 2-like
nr
ID XP_012090411.1
description PREDICTED: UDP-glucuronate 4-epimerase 3-like [Jatropha curcas]
swissprot
ID O81312
description UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1
trembl
ID A0A067JEY7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26228 PE=4 SV=1
Gene Ontology
ID GO:0016857
description udp-glucuronate 4-epimerase 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000152_440 0.0 - - PREDICTED: UDP-glucuronate 4-epimerase 3-like [Jatropha curcas]
2 Hb_000086_210 0.0801141652 - - ABC transporter family protein [Hevea brasiliensis]
3 Hb_000012_080 0.1008188056 - - PREDICTED: clathrin interactor EPSIN 1 [Jatropha curcas]
4 Hb_000935_040 0.1056135265 - - Uncharacterized protein isoform 2 [Theobroma cacao]
5 Hb_000139_300 0.1064434122 - - hypothetical protein POPTR_0008s19950g [Populus trichocarpa]
6 Hb_005074_040 0.1067940364 - - ATP binding protein, putative [Ricinus communis]
7 Hb_001579_300 0.1089282059 - - PREDICTED: probable polygalacturonase At1g80170 [Jatropha curcas]
8 Hb_001188_100 0.1107796453 - - hypothetical protein JCGZ_05568 [Jatropha curcas]
9 Hb_004306_110 0.1174156143 transcription factor TF Family: Trihelix PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH9 [Jatropha curcas]
10 Hb_005511_130 0.1265442975 - - PREDICTED: transmembrane protein 115-like [Populus euphratica]
11 Hb_000962_070 0.1289159718 - - PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic isoform X2 [Jatropha curcas]
12 Hb_014497_010 0.1316603763 - - PREDICTED: uncharacterized protein LOC105635153 [Jatropha curcas]
13 Hb_004730_020 0.1321315034 - - PREDICTED: uncharacterized protein LOC105641815 [Jatropha curcas]
14 Hb_009913_040 0.1325849723 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]
15 Hb_001847_050 0.1326098949 - - hypothetical protein CISIN_1g019843mg [Citrus sinensis]
16 Hb_000057_110 0.1326181316 - - PREDICTED: kinesin-13A [Jatropha curcas]
17 Hb_006829_060 0.1332588625 - - PREDICTED: microtubule-associated protein TORTIFOLIA1 isoform X1 [Jatropha curcas]
18 Hb_026549_070 0.1335863941 - - PREDICTED: UDP-glucuronic acid decarboxylase 1 [Jatropha curcas]
19 Hb_005563_010 0.1336371742 - - PREDICTED: kinesin-II 85 kDa subunit isoform X1 [Jatropha curcas]
20 Hb_004223_140 0.1368082282 - - endo-1,4-beta-glucanase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000152_440 Hb_000152_440 Hb_000086_210 Hb_000086_210 Hb_000152_440--Hb_000086_210 Hb_000012_080 Hb_000012_080 Hb_000152_440--Hb_000012_080 Hb_000935_040 Hb_000935_040 Hb_000152_440--Hb_000935_040 Hb_000139_300 Hb_000139_300 Hb_000152_440--Hb_000139_300 Hb_005074_040 Hb_005074_040 Hb_000152_440--Hb_005074_040 Hb_001579_300 Hb_001579_300 Hb_000152_440--Hb_001579_300 Hb_000086_210--Hb_000139_300 Hb_000086_210--Hb_005074_040 Hb_000749_020 Hb_000749_020 Hb_000086_210--Hb_000749_020 Hb_005563_010 Hb_005563_010 Hb_000086_210--Hb_005563_010 Hb_000086_210--Hb_000935_040 Hb_006829_060 Hb_006829_060 Hb_000012_080--Hb_006829_060 Hb_000057_110 Hb_000057_110 Hb_000012_080--Hb_000057_110 Hb_001188_100 Hb_001188_100 Hb_000012_080--Hb_001188_100 Hb_000012_080--Hb_005074_040 Hb_000665_180 Hb_000665_180 Hb_000012_080--Hb_000665_180 Hb_000395_110 Hb_000395_110 Hb_000012_080--Hb_000395_110 Hb_001369_630 Hb_001369_630 Hb_000935_040--Hb_001369_630 Hb_002007_320 Hb_002007_320 Hb_000935_040--Hb_002007_320 Hb_000935_040--Hb_000012_080 Hb_000935_040--Hb_000139_300 Hb_026549_070 Hb_026549_070 Hb_000139_300--Hb_026549_070 Hb_000139_300--Hb_005074_040 Hb_004306_110 Hb_004306_110 Hb_000139_300--Hb_004306_110 Hb_009079_050 Hb_009079_050 Hb_000139_300--Hb_009079_050 Hb_000808_150 Hb_000808_150 Hb_000139_300--Hb_000808_150 Hb_014497_010 Hb_014497_010 Hb_005074_040--Hb_014497_010 Hb_000689_050 Hb_000689_050 Hb_005074_040--Hb_000689_050 Hb_008025_010 Hb_008025_010 Hb_005074_040--Hb_008025_010 Hb_004730_020 Hb_004730_020 Hb_001579_300--Hb_004730_020 Hb_005511_130 Hb_005511_130 Hb_001579_300--Hb_005511_130 Hb_000388_080 Hb_000388_080 Hb_001579_300--Hb_000388_080 Hb_006925_050 Hb_006925_050 Hb_001579_300--Hb_006925_050 Hb_000527_080 Hb_000527_080 Hb_001579_300--Hb_000527_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.29822 3.35989 19.3155 23.9156 2.299 3.55559
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.81972 5.17762 5.90393 3.64538 14.6546

CAGE analysis