Hb_000154_040

Information

Type -
Description -
Location Contig154: 90135-91779
Sequence    

Annotation

kegg
ID pop:POPTR_0017s13520g
description hypothetical protein
nr
ID KDP24306.1
description hypothetical protein JCGZ_25602 [Jatropha curcas]
swissprot
ID Q5NBM0
description Putative serpin-Z12 OS=Oryza sativa subsp. japonica GN=Os01g0267300 PE=3 SV=1
trembl
ID A0A067JK08
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25602 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000154_040 0.0 - - hypothetical protein JCGZ_25602 [Jatropha curcas]
2 Hb_000510_080 0.1484453423 - - hypothetical protein CICLE_v10021453mg [Citrus clementina]
3 Hb_002872_050 0.1580305246 - - PREDICTED: thioredoxin-like 3-2, chloroplastic [Jatropha curcas]
4 Hb_000742_280 0.1661117978 - - ATP binding protein, putative [Ricinus communis]
5 Hb_007894_050 0.1680614873 - - PREDICTED: reactive Intermediate Deaminase A, chloroplastic [Jatropha curcas]
6 Hb_000085_350 0.1719805457 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-2-like isoform X1 [Jatropha curcas]
7 Hb_005345_010 0.1725118037 - - PREDICTED: telomere repeat-binding factor 4-like [Jatropha curcas]
8 Hb_000187_040 0.1758671519 - - PREDICTED: pyridoxal kinase isoform X5 [Vitis vinifera]
9 Hb_014720_110 0.1797221575 - - PREDICTED: GDSL esterase/lipase At5g62930 [Tarenaya hassleriana]
10 Hb_048937_060 0.1819706379 - - PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Jatropha curcas]
11 Hb_000072_200 0.1825969697 - - PREDICTED: myb-like protein X [Jatropha curcas]
12 Hb_007827_010 0.1826100328 - - PREDICTED: uncharacterized protein C12B10.15c [Jatropha curcas]
13 Hb_003678_020 0.1850210841 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000107_150 0.185808205 - - PREDICTED: 40S ribosomal protein S4-3 [Jatropha curcas]
15 Hb_007747_050 0.1862933113 - - Peptidyl-prolyl cis-trans isomerase cypE, putative [Ricinus communis]
16 Hb_000012_250 0.1863735625 - - hypothetical protein L484_019524 [Morus notabilis]
17 Hb_000035_270 0.1865463818 - - PREDICTED: uncharacterized protein LOC105637542 [Jatropha curcas]
18 Hb_131181_010 0.1888281614 - - transcription initiation factor iia (tfiia), gamma chain, putative [Ricinus communis]
19 Hb_000160_180 0.1904194543 - - methionyl-tRNA formyltransferase, putative [Ricinus communis]
20 Hb_001318_260 0.1912629672 - - PREDICTED: nitrogen regulatory protein P-II homolog [Jatropha curcas]

Gene co-expression network

sample Hb_000154_040 Hb_000154_040 Hb_000510_080 Hb_000510_080 Hb_000154_040--Hb_000510_080 Hb_002872_050 Hb_002872_050 Hb_000154_040--Hb_002872_050 Hb_000742_280 Hb_000742_280 Hb_000154_040--Hb_000742_280 Hb_007894_050 Hb_007894_050 Hb_000154_040--Hb_007894_050 Hb_000085_350 Hb_000085_350 Hb_000154_040--Hb_000085_350 Hb_005345_010 Hb_005345_010 Hb_000154_040--Hb_005345_010 Hb_002900_110 Hb_002900_110 Hb_000510_080--Hb_002900_110 Hb_000510_030 Hb_000510_030 Hb_000510_080--Hb_000510_030 Hb_001277_030 Hb_001277_030 Hb_000510_080--Hb_001277_030 Hb_001898_050 Hb_001898_050 Hb_000510_080--Hb_001898_050 Hb_007199_020 Hb_007199_020 Hb_000510_080--Hb_007199_020 Hb_005276_040 Hb_005276_040 Hb_000510_080--Hb_005276_040 Hb_007827_010 Hb_007827_010 Hb_002872_050--Hb_007827_010 Hb_003050_280 Hb_003050_280 Hb_002872_050--Hb_003050_280 Hb_000056_070 Hb_000056_070 Hb_002872_050--Hb_000056_070 Hb_000107_150 Hb_000107_150 Hb_002872_050--Hb_000107_150 Hb_001318_260 Hb_001318_260 Hb_002872_050--Hb_001318_260 Hb_011689_120 Hb_011689_120 Hb_002872_050--Hb_011689_120 Hb_024074_010 Hb_024074_010 Hb_000742_280--Hb_024074_010 Hb_131181_010 Hb_131181_010 Hb_000742_280--Hb_131181_010 Hb_001114_080 Hb_001114_080 Hb_000742_280--Hb_001114_080 Hb_000317_070 Hb_000317_070 Hb_000742_280--Hb_000317_070 Hb_010560_030 Hb_010560_030 Hb_000742_280--Hb_010560_030 Hb_000069_700 Hb_000069_700 Hb_000742_280--Hb_000069_700 Hb_001073_080 Hb_001073_080 Hb_007894_050--Hb_001073_080 Hb_001301_340 Hb_001301_340 Hb_007894_050--Hb_001301_340 Hb_003126_130 Hb_003126_130 Hb_007894_050--Hb_003126_130 Hb_007894_050--Hb_002872_050 Hb_000392_550 Hb_000392_550 Hb_007894_050--Hb_000392_550 Hb_001377_450 Hb_001377_450 Hb_007894_050--Hb_001377_450 Hb_007747_050 Hb_007747_050 Hb_000085_350--Hb_007747_050 Hb_000538_120 Hb_000538_120 Hb_000085_350--Hb_000538_120 Hb_000735_090 Hb_000735_090 Hb_000085_350--Hb_000735_090 Hb_000155_160 Hb_000155_160 Hb_000085_350--Hb_000155_160 Hb_000302_140 Hb_000302_140 Hb_000085_350--Hb_000302_140 Hb_002811_170 Hb_002811_170 Hb_000085_350--Hb_002811_170 Hb_006059_020 Hb_006059_020 Hb_005345_010--Hb_006059_020 Hb_003622_030 Hb_003622_030 Hb_005345_010--Hb_003622_030 Hb_014720_110 Hb_014720_110 Hb_005345_010--Hb_014720_110 Hb_000035_270 Hb_000035_270 Hb_005345_010--Hb_000035_270 Hb_003747_230 Hb_003747_230 Hb_005345_010--Hb_003747_230 Hb_005345_010--Hb_002872_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.188668 0.0346617 0.29197 0.124029 0.0343406 0.0442394
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.315466 0.496016 0.110861 0.327691 0.245802

CAGE analysis