Hb_000155_090

Information

Type -
Description -
Location Contig155: 200880-204541
Sequence    

Annotation

kegg
ID rcu:RCOM_1672930
description glutaredoxin, grx, putative
nr
ID XP_012091677.1
description PREDICTED: glutaredoxin-C9 [Jatropha curcas]
swissprot
ID Q9SGP6
description Glutaredoxin-C9 OS=Arabidopsis thaliana GN=GRXC9 PE=1 SV=1
trembl
ID A0A067JE28
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21489 PE=4 SV=1
Gene Ontology
ID GO:0009055
description glutaredoxin-like family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000155_090 0.0 - - PREDICTED: glutaredoxin-C9 [Jatropha curcas]
2 Hb_000189_540 0.1478414384 - - PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Jatropha curcas]
3 Hb_007441_170 0.1527096772 - - PREDICTED: rac-like GTP-binding protein RAC2 [Jatropha curcas]
4 Hb_020805_060 0.1699944379 - - PREDICTED: protein S-acyltransferase 21 [Jatropha curcas]
5 Hb_000152_210 0.1749715976 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000352_200 0.1767253864 - - PREDICTED: OTU domain-containing protein DDB_G0284757 isoform X1 [Jatropha curcas]
7 Hb_000011_300 0.1822194198 - - PREDICTED: proteasome subunit alpha type-5 isoform X1 [Gossypium raimondii]
8 Hb_170426_010 0.1985761234 - - cytochrome b5 isoform Cb5-B [Vernicia fordii]
9 Hb_000008_380 0.2037095349 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_003178_020 0.2039651244 transcription factor TF Family: B3 conserved hypothetical protein [Ricinus communis]
11 Hb_000768_140 0.2217007654 transcription factor TF Family: SWI/SNF-BAF60b tRNA (guanine-n(7)-)-methyltransferase, putative [Ricinus communis]
12 Hb_002631_300 0.2265976032 - - PREDICTED: uncharacterized protein LOC105646181 [Jatropha curcas]
13 Hb_004787_040 0.228220323 - - conserved hypothetical protein [Ricinus communis]
14 Hb_004679_060 0.2387304844 - - conserved hypothetical protein [Ricinus communis]
15 Hb_006028_020 0.2422713644 - - PREDICTED: 60S ribosomal protein L38-like [Cicer arietinum]
16 Hb_000173_050 0.2433288951 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
17 Hb_001322_070 0.2452328513 - - protein with unknown function [Ricinus communis]
18 Hb_106552_070 0.245853314 - - conserved hypothetical protein [Ricinus communis]
19 Hb_098533_020 0.247817451 - - PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Jatropha curcas]
20 Hb_001767_060 0.2491629579 - - PREDICTED: sulfate transporter 4.1, chloroplastic-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000155_090 Hb_000155_090 Hb_000189_540 Hb_000189_540 Hb_000155_090--Hb_000189_540 Hb_007441_170 Hb_007441_170 Hb_000155_090--Hb_007441_170 Hb_020805_060 Hb_020805_060 Hb_000155_090--Hb_020805_060 Hb_000152_210 Hb_000152_210 Hb_000155_090--Hb_000152_210 Hb_000352_200 Hb_000352_200 Hb_000155_090--Hb_000352_200 Hb_000011_300 Hb_000011_300 Hb_000155_090--Hb_000011_300 Hb_001322_070 Hb_001322_070 Hb_000189_540--Hb_001322_070 Hb_002686_180 Hb_002686_180 Hb_000189_540--Hb_002686_180 Hb_098315_020 Hb_098315_020 Hb_000189_540--Hb_098315_020 Hb_000189_540--Hb_020805_060 Hb_000189_540--Hb_000152_210 Hb_007441_170--Hb_000152_210 Hb_006028_020 Hb_006028_020 Hb_007441_170--Hb_006028_020 Hb_007441_170--Hb_000189_540 Hb_007441_170--Hb_000011_300 Hb_000523_110 Hb_000523_110 Hb_007441_170--Hb_000523_110 Hb_000768_140 Hb_000768_140 Hb_020805_060--Hb_000768_140 Hb_001164_030 Hb_001164_030 Hb_020805_060--Hb_001164_030 Hb_020805_060--Hb_000011_300 Hb_170426_010 Hb_170426_010 Hb_020805_060--Hb_170426_010 Hb_004787_040 Hb_004787_040 Hb_020805_060--Hb_004787_040 Hb_001450_030 Hb_001450_030 Hb_000152_210--Hb_001450_030 Hb_015807_160 Hb_015807_160 Hb_000152_210--Hb_015807_160 Hb_000152_210--Hb_000352_200 Hb_002309_050 Hb_002309_050 Hb_000352_200--Hb_002309_050 Hb_000352_200--Hb_000189_540 Hb_052764_070 Hb_052764_070 Hb_000352_200--Hb_052764_070 Hb_000352_200--Hb_004787_040 Hb_000011_300--Hb_000189_540 Hb_000011_300--Hb_170426_010 Hb_000291_270 Hb_000291_270 Hb_000011_300--Hb_000291_270 Hb_004089_020 Hb_004089_020 Hb_000011_300--Hb_004089_020 Hb_000005_300 Hb_000005_300 Hb_000011_300--Hb_000005_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.74884 11.3255 101.291 90.6826 0.550898 1.71448
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
31.2855 175.949 29.9216 8.97562 10.5489

CAGE analysis