Hb_000155_180

Information

Type -
Description -
Location Contig155: 290944-294264
Sequence    

Annotation

kegg
ID rcu:RCOM_1012220
description 28 kDa heat- and acid-stable phosphoprotein, putative
nr
ID XP_012091694.1
description PREDICTED: 28 kDa heat- and acid-stable phosphoprotein [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JLZ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21501 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13443: 290981-294225 , PASA_asmbl_13444: 291288-291647
cDNA
(Sanger)
(ID:Location)		 021_N18.ab1: 290981-294014 , 051_M24.ab1: 290981-294048

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000155_180 0.0 - - PREDICTED: 28 kDa heat- and acid-stable phosphoprotein [Jatropha curcas]
2 Hb_001377_180 0.0546974167 - - PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1 [Jatropha curcas]
3 Hb_000771_100 0.0741356094 - - Os06g0527300 [Oryza sativa Japonica Group]
4 Hb_003011_040 0.082056636 - - PREDICTED: uncharacterized protein LOC102629536 isoform X2 [Citrus sinensis]
5 Hb_004502_020 0.0872661007 - - PREDICTED: DNA-directed RNA polymerase II subunit 4 [Jatropha curcas]
6 Hb_086703_010 0.0969135435 - - PREDICTED: F-box protein At5g52880 [Jatropha curcas]
7 Hb_002272_260 0.0994027704 - - -
8 Hb_031089_040 0.1028638353 - - thioredoxin H-type 1 [Hevea brasiliensis]
9 Hb_010180_010 0.1032836548 - - PREDICTED: uncharacterized protein LOC105631104 [Jatropha curcas]
10 Hb_000080_060 0.1066771869 - - RNA polymerase I, II and III subunit RPB8, partial [Manihot esculenta]
11 Hb_004223_220 0.1082611351 - - PREDICTED: uncharacterized protein LOC105635366 isoform X1 [Jatropha curcas]
12 Hb_184570_010 0.109752281 - - PREDICTED: COP9 signalosome complex subunit 8 [Jatropha curcas]
13 Hb_093666_020 0.1115031016 - - PREDICTED: 60S ribosomal protein L7-2-like [Jatropha curcas]
14 Hb_003994_270 0.1160626853 - - PREDICTED: uncharacterized protein LOC105646152 [Jatropha curcas]
15 Hb_136731_010 0.1172325323 - - PREDICTED: uncharacterized protein LOC105628378 isoform X4 [Jatropha curcas]
16 Hb_001269_320 0.118613416 - - 40S ribosomal protein S12A [Hevea brasiliensis]
17 Hb_007432_080 0.1194208027 - - PREDICTED: mannose-6-phosphate isomerase 1-like [Jatropha curcas]
18 Hb_001998_230 0.1195113787 - - PREDICTED: coatomer subunit epsilon-1 [Jatropha curcas]
19 Hb_002374_020 0.1197030342 - - PREDICTED: protein KRTCAP2 homolog [Jatropha curcas]
20 Hb_000676_290 0.1209497604 - - PREDICTED: glutaredoxin-C3 [Jatropha curcas]

Gene co-expression network

sample Hb_000155_180 Hb_000155_180 Hb_001377_180 Hb_001377_180 Hb_000155_180--Hb_001377_180 Hb_000771_100 Hb_000771_100 Hb_000155_180--Hb_000771_100 Hb_003011_040 Hb_003011_040 Hb_000155_180--Hb_003011_040 Hb_004502_020 Hb_004502_020 Hb_000155_180--Hb_004502_020 Hb_086703_010 Hb_086703_010 Hb_000155_180--Hb_086703_010 Hb_002272_260 Hb_002272_260 Hb_000155_180--Hb_002272_260 Hb_136731_010 Hb_136731_010 Hb_001377_180--Hb_136731_010 Hb_001377_180--Hb_000771_100 Hb_002374_020 Hb_002374_020 Hb_001377_180--Hb_002374_020 Hb_003994_270 Hb_003994_270 Hb_001377_180--Hb_003994_270 Hb_001377_180--Hb_003011_040 Hb_000771_100--Hb_002272_260 Hb_000347_340 Hb_000347_340 Hb_000771_100--Hb_000347_340 Hb_000771_100--Hb_086703_010 Hb_000620_080 Hb_000620_080 Hb_000771_100--Hb_000620_080 Hb_000676_290 Hb_000676_290 Hb_000771_100--Hb_000676_290 Hb_004223_220 Hb_004223_220 Hb_003011_040--Hb_004223_220 Hb_093666_020 Hb_093666_020 Hb_003011_040--Hb_093666_020 Hb_010180_010 Hb_010180_010 Hb_003011_040--Hb_010180_010 Hb_005389_150 Hb_005389_150 Hb_003011_040--Hb_005389_150 Hb_001269_320 Hb_001269_320 Hb_003011_040--Hb_001269_320 Hb_000505_140 Hb_000505_140 Hb_004502_020--Hb_000505_140 Hb_031089_040 Hb_031089_040 Hb_004502_020--Hb_031089_040 Hb_000003_730 Hb_000003_730 Hb_004502_020--Hb_000003_730 Hb_002207_110 Hb_002207_110 Hb_004502_020--Hb_002207_110 Hb_032202_090 Hb_032202_090 Hb_004502_020--Hb_032202_090 Hb_003043_070 Hb_003043_070 Hb_086703_010--Hb_003043_070 Hb_086703_010--Hb_001269_320 Hb_086703_010--Hb_003011_040 Hb_003405_060 Hb_003405_060 Hb_086703_010--Hb_003405_060 Hb_004453_150 Hb_004453_150 Hb_002272_260--Hb_004453_150 Hb_002272_260--Hb_000676_290 Hb_002301_280 Hb_002301_280 Hb_002272_260--Hb_002301_280 Hb_002259_150 Hb_002259_150 Hb_002272_260--Hb_002259_150 Hb_011174_010 Hb_011174_010 Hb_002272_260--Hb_011174_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
36.4156 8.1554 16.1298 45.0053 28.3366 90.4024
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
64.7293 66.1154 18.3483 16.9344 14.3934

CAGE analysis