Hb_000155_270

Information

Type transcription factor
Description TF Family: ERF
Location Contig155: 364702-365505
Sequence    

Annotation

kegg
ID pop:POPTR_0004s05110g
description POPTRDRAFT_758827; hypothetical protein
nr
ID XP_012092418.1
description PREDICTED: ethylene-responsive transcription factor ERF098 [Jatropha curcas]
swissprot
ID O49515
description Ethylene-responsive transcription factor ERF091 OS=Arabidopsis thaliana GN=ERF091 PE=1 SV=1
trembl
ID A0A067JB92
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21508 PE=4 SV=1
Gene Ontology
ID GO:0003677
description ethylene-responsive transcription factor erf091-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000155_270 0.0 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF098 [Jatropha curcas]
2 Hb_060272_010 0.0433590892 - - PREDICTED: gibberellin 20 oxidase 2 [Populus euphratica]
3 Hb_006268_010 0.0518162111 - - hypothetical protein EUGRSUZ_B00966 [Eucalyptus grandis]
4 Hb_001157_130 0.0584631651 - - PREDICTED: transmembrane protein 45B-like [Jatropha curcas]
5 Hb_007850_040 0.0602500094 - - conserved hypothetical protein [Ricinus communis]
6 Hb_086122_030 0.0626416959 - - D-glycerate 3-kinase, chloroplast precursor, putative [Ricinus communis]
7 Hb_161981_010 0.0852671956 - - brassinosteroid insensitive 1 -like protein [Gossypium arboreum]
8 Hb_000616_060 0.0869962857 - - -
9 Hb_000575_010 0.0875343973 - - PREDICTED: uncharacterized protein LOC103454030 [Malus domestica]
10 Hb_000891_060 0.0883030156 - - hypothetical protein JCGZ_11234 [Jatropha curcas]
11 Hb_002282_030 0.0910227572 - - -
12 Hb_009543_040 0.1035555796 - - -
13 Hb_132438_010 0.1119595679 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
14 Hb_017866_010 0.116876148 - - kinase family protein [Populus trichocarpa]
15 Hb_000761_030 0.1214331515 transcription factor TF Family: ERF Transcriptional factor TINY, putative [Ricinus communis]
16 Hb_005056_030 0.1225490767 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
17 Hb_000751_210 0.1300068262 - - PREDICTED: petal death protein isoform X2 [Jatropha curcas]
18 Hb_000521_350 0.1319718659 - - unnamed protein product [Vitis vinifera]
19 Hb_002622_020 0.1385290374 - - -
20 Hb_004724_070 0.1395382501 transcription factor TF Family: bZIP PREDICTED: transcription factor TGA2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000155_270 Hb_000155_270 Hb_060272_010 Hb_060272_010 Hb_000155_270--Hb_060272_010 Hb_006268_010 Hb_006268_010 Hb_000155_270--Hb_006268_010 Hb_001157_130 Hb_001157_130 Hb_000155_270--Hb_001157_130 Hb_007850_040 Hb_007850_040 Hb_000155_270--Hb_007850_040 Hb_086122_030 Hb_086122_030 Hb_000155_270--Hb_086122_030 Hb_161981_010 Hb_161981_010 Hb_000155_270--Hb_161981_010 Hb_060272_010--Hb_001157_130 Hb_060272_010--Hb_086122_030 Hb_060272_010--Hb_161981_010 Hb_017866_010 Hb_017866_010 Hb_060272_010--Hb_017866_010 Hb_132438_010 Hb_132438_010 Hb_060272_010--Hb_132438_010 Hb_006268_010--Hb_007850_040 Hb_005056_030 Hb_005056_030 Hb_006268_010--Hb_005056_030 Hb_002622_020 Hb_002622_020 Hb_006268_010--Hb_002622_020 Hb_006268_010--Hb_086122_030 Hb_006268_010--Hb_060272_010 Hb_009543_040 Hb_009543_040 Hb_001157_130--Hb_009543_040 Hb_001157_130--Hb_132438_010 Hb_000575_010 Hb_000575_010 Hb_001157_130--Hb_000575_010 Hb_000616_060 Hb_000616_060 Hb_001157_130--Hb_000616_060 Hb_007850_040--Hb_002622_020 Hb_002282_030 Hb_002282_030 Hb_007850_040--Hb_002282_030 Hb_000891_060 Hb_000891_060 Hb_007850_040--Hb_000891_060 Hb_000472_030 Hb_000472_030 Hb_007850_040--Hb_000472_030 Hb_086122_030--Hb_161981_010 Hb_000521_350 Hb_000521_350 Hb_086122_030--Hb_000521_350 Hb_086122_030--Hb_001157_130 Hb_161981_010--Hb_000521_350 Hb_161981_010--Hb_006268_010 Hb_148817_010 Hb_148817_010 Hb_161981_010--Hb_148817_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0588433 0 0.0809565 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0853333 0

CAGE analysis