Hb_000157_110

Information

Type -
Description -
Location Contig157: 100397-103575
Sequence    

Annotation

kegg
ID mbr:MONBRDRAFT_34581
description hypothetical protein
nr
ID KGN48124.1
description hypothetical protein Csa_6G439410 [Cucumis sativus]
swissprot
ID P83775
description Putative NADPH-dependent methylglyoxal reductase GRP2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GRP2 PE=1 SV=2
trembl
ID A0A0A0KH32
description Uncharacterized protein OS=Cucumis sativus GN=Csa_6G439410 PE=4 SV=1
Gene Ontology
ID GO:0045552
description tetraketide alpha-pyrone reductase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000157_110 0.0 - - hypothetical protein Csa_6G439410 [Cucumis sativus]
2 Hb_158144_020 0.2017768375 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Vitis vinifera]
3 Hb_000300_310 0.2018770255 - - PREDICTED: uncharacterized protein LOC104896902 [Beta vulgaris subsp. vulgaris]
4 Hb_001390_020 0.2093638764 - - malate dehydrogenase, putative [Ricinus communis]
5 Hb_000890_110 0.2113002406 - - PREDICTED: GTP-binding protein OBGC, chloroplastic [Populus euphratica]
6 Hb_000613_260 0.2145362141 - - hypothetical protein VITISV_043487 [Vitis vinifera]
7 Hb_000014_190 0.2160140456 - - Phytoene dehydrogenase, putative [Ricinus communis]
8 Hb_000172_620 0.2170172404 - - hypothetical protein VITISV_033646 [Vitis vinifera]
9 Hb_002400_150 0.2282142132 - - PREDICTED: uncharacterized protein LOC105650070 isoform X1 [Jatropha curcas]
10 Hb_001811_080 0.2362717115 - - PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Jatropha curcas]
11 Hb_078477_060 0.2369393803 - - PREDICTED: histone-lysine N-methyltransferase ATX4 [Jatropha curcas]
12 Hb_021313_010 0.2370800094 - - hypothetical protein POPTR_0010s24380g [Populus trichocarpa]
13 Hb_002411_020 0.2386821104 - - hypothetical protein JCGZ_24577 [Jatropha curcas]
14 Hb_000062_520 0.2398536155 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000667_140 0.2441100908 - - PREDICTED: uridine kinase-like protein 3 isoform X1 [Jatropha curcas]
16 Hb_000012_160 0.2460302549 - - PREDICTED: uncharacterized protein LOC105638175 isoform X1 [Jatropha curcas]
17 Hb_166127_030 0.2487596492 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_000402_170 0.2510900397 - - PREDICTED: glutamate--glyoxylate aminotransferase 2 [Jatropha curcas]
19 Hb_000963_090 0.2574609671 rubber biosynthesis Gene Name: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Hevea brasiliensis]
20 Hb_000803_240 0.2574692029 - - hypothetical protein CICLE_v100143612mg, partial [Citrus clementina]

Gene co-expression network

sample Hb_000157_110 Hb_000157_110 Hb_158144_020 Hb_158144_020 Hb_000157_110--Hb_158144_020 Hb_000300_310 Hb_000300_310 Hb_000157_110--Hb_000300_310 Hb_001390_020 Hb_001390_020 Hb_000157_110--Hb_001390_020 Hb_000890_110 Hb_000890_110 Hb_000157_110--Hb_000890_110 Hb_000613_260 Hb_000613_260 Hb_000157_110--Hb_000613_260 Hb_000014_190 Hb_000014_190 Hb_000157_110--Hb_000014_190 Hb_000058_080 Hb_000058_080 Hb_158144_020--Hb_000058_080 Hb_158144_020--Hb_000890_110 Hb_000189_250 Hb_000189_250 Hb_158144_020--Hb_000189_250 Hb_000640_260 Hb_000640_260 Hb_158144_020--Hb_000640_260 Hb_000402_170 Hb_000402_170 Hb_158144_020--Hb_000402_170 Hb_166127_030 Hb_166127_030 Hb_158144_020--Hb_166127_030 Hb_000300_310--Hb_000014_190 Hb_000963_090 Hb_000963_090 Hb_000300_310--Hb_000963_090 Hb_078477_060 Hb_078477_060 Hb_000300_310--Hb_078477_060 Hb_002226_050 Hb_002226_050 Hb_000300_310--Hb_002226_050 Hb_001811_080 Hb_001811_080 Hb_000300_310--Hb_001811_080 Hb_031139_010 Hb_031139_010 Hb_001390_020--Hb_031139_010 Hb_000754_050 Hb_000754_050 Hb_001390_020--Hb_000754_050 Hb_014361_110 Hb_014361_110 Hb_001390_020--Hb_014361_110 Hb_002232_380 Hb_002232_380 Hb_001390_020--Hb_002232_380 Hb_003494_030 Hb_003494_030 Hb_001390_020--Hb_003494_030 Hb_003106_170 Hb_003106_170 Hb_001390_020--Hb_003106_170 Hb_007002_010 Hb_007002_010 Hb_000890_110--Hb_007002_010 Hb_000683_080 Hb_000683_080 Hb_000890_110--Hb_000683_080 Hb_000038_020 Hb_000038_020 Hb_000890_110--Hb_000038_020 Hb_000352_220 Hb_000352_220 Hb_000890_110--Hb_000352_220 Hb_168031_020 Hb_168031_020 Hb_000890_110--Hb_168031_020 Hb_024714_040 Hb_024714_040 Hb_000613_260--Hb_024714_040 Hb_000613_260--Hb_001390_020 Hb_000613_260--Hb_000300_310 Hb_002400_150 Hb_002400_150 Hb_000613_260--Hb_002400_150 Hb_012707_020 Hb_012707_020 Hb_000613_260--Hb_012707_020 Hb_000014_190--Hb_078477_060 Hb_003226_190 Hb_003226_190 Hb_000014_190--Hb_003226_190 Hb_001080_030 Hb_001080_030 Hb_000014_190--Hb_001080_030 Hb_009620_060 Hb_009620_060 Hb_000014_190--Hb_009620_060 Hb_000014_190--Hb_000890_110 Hb_000014_190--Hb_000963_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.163961 0.0496789 2.11423 0.427493 0.220424 1.52945
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.04087 0.51179 0.336078 3.0045 9.40788

CAGE analysis