Hb_000161_180

Information

Type -
Description -
Location Contig161: 186658-190725
Sequence    

Annotation

kegg
ID pxb:103945132
description protein argonaute 2-like
nr
ID XP_010092648.1
description Protein argonaute 2 [Morus notabilis]
swissprot
ID Q9SHF3
description Protein argonaute 2 OS=Arabidopsis thaliana GN=AGO2 PE=1 SV=1
trembl
ID W9R1U2
description Protein argonaute OS=Morus notabilis GN=L484_006244 PE=3 SV=1
Gene Ontology
ID GO:0003676
description protein argonaute 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000161_180 0.0 - - Protein argonaute 2 [Morus notabilis]
2 Hb_182970_010 0.1733939782 - - calmodulin-binding protein 60-D [Populus trichocarpa]
3 Hb_002026_050 0.1792834563 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
4 Hb_001329_080 0.1810740308 - - PREDICTED: probable protein phosphatase 2C 49 [Jatropha curcas]
5 Hb_000465_350 0.1824167317 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2 [Jatropha curcas]
6 Hb_005408_080 0.1829288601 - - PREDICTED: U-box domain-containing protein 16 [Jatropha curcas]
7 Hb_007163_050 0.1847520445 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA9 [Jatropha curcas]
8 Hb_002119_040 0.1875260343 - - receptor protein kinase, putative [Ricinus communis]
9 Hb_002400_040 0.1877813209 - - PREDICTED: uncharacterized protein LOC105637633 [Jatropha curcas]
10 Hb_002048_070 0.1893296706 - - hypothetical protein JCGZ_15146 [Jatropha curcas]
11 Hb_000210_160 0.1912214567 - - PREDICTED: protein YLS9-like [Jatropha curcas]
12 Hb_012272_010 0.194596317 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
13 Hb_001514_250 0.195247334 - - GAST1 protein precursor, putative [Ricinus communis]
14 Hb_006615_160 0.1959152578 - - PREDICTED: UDP-glycosyltransferase 89B1-like [Jatropha curcas]
15 Hb_000563_630 0.1965844943 - - PREDICTED: uncharacterized protein LOC105643442 [Jatropha curcas]
16 Hb_001472_140 0.1980824896 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
17 Hb_000152_170 0.1997134652 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Jatropha curcas]
18 Hb_000031_300 0.2010411786 - - PREDICTED: histidine kinase 5 [Jatropha curcas]
19 Hb_062226_150 0.201699034 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
20 Hb_005054_020 0.2018725751 - - PREDICTED: probable sugar phosphate/phosphate translocator At3g11320 [Jatropha curcas]

Gene co-expression network

sample Hb_000161_180 Hb_000161_180 Hb_182970_010 Hb_182970_010 Hb_000161_180--Hb_182970_010 Hb_002026_050 Hb_002026_050 Hb_000161_180--Hb_002026_050 Hb_001329_080 Hb_001329_080 Hb_000161_180--Hb_001329_080 Hb_000465_350 Hb_000465_350 Hb_000161_180--Hb_000465_350 Hb_005408_080 Hb_005408_080 Hb_000161_180--Hb_005408_080 Hb_007163_050 Hb_007163_050 Hb_000161_180--Hb_007163_050 Hb_003633_150 Hb_003633_150 Hb_182970_010--Hb_003633_150 Hb_002400_040 Hb_002400_040 Hb_182970_010--Hb_002400_040 Hb_182970_010--Hb_001329_080 Hb_001226_170 Hb_001226_170 Hb_182970_010--Hb_001226_170 Hb_003209_090 Hb_003209_090 Hb_182970_010--Hb_003209_090 Hb_182970_010--Hb_005408_080 Hb_004109_210 Hb_004109_210 Hb_002026_050--Hb_004109_210 Hb_000365_280 Hb_000365_280 Hb_002026_050--Hb_000365_280 Hb_002893_030 Hb_002893_030 Hb_002026_050--Hb_002893_030 Hb_001059_110 Hb_001059_110 Hb_002026_050--Hb_001059_110 Hb_002026_050--Hb_005408_080 Hb_002026_050--Hb_007163_050 Hb_001472_140 Hb_001472_140 Hb_001329_080--Hb_001472_140 Hb_000009_200 Hb_000009_200 Hb_001329_080--Hb_000009_200 Hb_005714_100 Hb_005714_100 Hb_001329_080--Hb_005714_100 Hb_007382_100 Hb_007382_100 Hb_001329_080--Hb_007382_100 Hb_056196_060 Hb_056196_060 Hb_001329_080--Hb_056196_060 Hb_002048_070 Hb_002048_070 Hb_000465_350--Hb_002048_070 Hb_023386_060 Hb_023386_060 Hb_000465_350--Hb_023386_060 Hb_001141_210 Hb_001141_210 Hb_000465_350--Hb_001141_210 Hb_002676_110 Hb_002676_110 Hb_000465_350--Hb_002676_110 Hb_000060_080 Hb_000060_080 Hb_000465_350--Hb_000060_080 Hb_003968_010 Hb_003968_010 Hb_000465_350--Hb_003968_010 Hb_005408_080--Hb_002400_040 Hb_000892_030 Hb_000892_030 Hb_005408_080--Hb_000892_030 Hb_094437_050 Hb_094437_050 Hb_005408_080--Hb_094437_050 Hb_000110_260 Hb_000110_260 Hb_005408_080--Hb_000110_260 Hb_005725_280 Hb_005725_280 Hb_005408_080--Hb_005725_280 Hb_005408_080--Hb_001329_080 Hb_188281_010 Hb_188281_010 Hb_007163_050--Hb_188281_010 Hb_007749_020 Hb_007749_020 Hb_007163_050--Hb_007749_020 Hb_000163_040 Hb_000163_040 Hb_007163_050--Hb_000163_040 Hb_000563_140 Hb_000563_140 Hb_007163_050--Hb_000563_140 Hb_001514_250 Hb_001514_250 Hb_007163_050--Hb_001514_250
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.169322 0.170878 0.28439 0.00583122 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.028257 0.0111181 0.0212768 0.0485002 0.0237323

CAGE analysis