Hb_000161_210

Information

Type -
Description -
Location Contig161: 223287-227672
Sequence    

Annotation

kegg
ID rcu:RCOM_1374130
description hypothetical protein
nr
ID XP_012066650.1
description PREDICTED: uncharacterized protein At5g49945-like [Jatropha curcas]
swissprot
ID Q94CC0
description Uncharacterized protein At5g49945 OS=Arabidopsis thaliana GN=At5g49945 PE=2 SV=1
trembl
ID A0A067LEA4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00221 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14439: 223550-228030 , PASA_asmbl_14441: 224428-230286
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000161_210 0.0 - - PREDICTED: uncharacterized protein At5g49945-like [Jatropha curcas]
2 Hb_003038_040 0.0680001328 transcription factor TF Family: TUB phosphoric diester hydrolase, putative [Ricinus communis]
3 Hb_007982_030 0.0682761628 - - PREDICTED: probable inactive receptor kinase At5g10020 isoform X1 [Jatropha curcas]
4 Hb_001821_150 0.0700267706 - - PREDICTED: potassium transporter 7-like [Jatropha curcas]
5 Hb_000352_300 0.0770926489 - - PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Jatropha curcas]
6 Hb_001703_050 0.0797413154 - - Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]
7 Hb_030982_010 0.0843161906 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002007_260 0.0850953555 - - beta-mannosidase, putative [Ricinus communis]
9 Hb_121089_030 0.0853667248 - - PREDICTED: dynamin-related protein 5A [Jatropha curcas]
10 Hb_000184_070 0.0855917592 - - PREDICTED: uncharacterized protein LOC105641537 isoform X1 [Jatropha curcas]
11 Hb_002596_060 0.087859919 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001159_030 0.0884294327 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
13 Hb_000054_040 0.0885456639 - - PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 [Jatropha curcas]
14 Hb_001552_030 0.0885901771 - - PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like isoform X1 [Jatropha curcas]
15 Hb_065500_020 0.0886492065 - - Exocyst complex component sec3A isoform 1 [Theobroma cacao]
16 Hb_003994_220 0.0901319238 - - PREDICTED: V-type proton ATPase catalytic subunit A [Jatropha curcas]
17 Hb_000320_290 0.0910417765 - - PREDICTED: putative lactoylglutathione lyase [Jatropha curcas]
18 Hb_060980_010 0.0926847068 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like isoform X1 [Populus euphratica]
19 Hb_021165_010 0.0927348145 - - PREDICTED: splicing factor U2af large subunit B-like isoform X1 [Jatropha curcas]
20 Hb_019840_030 0.0934160001 - - PREDICTED: KH domain-containing protein At4g18375 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000161_210 Hb_000161_210 Hb_003038_040 Hb_003038_040 Hb_000161_210--Hb_003038_040 Hb_007982_030 Hb_007982_030 Hb_000161_210--Hb_007982_030 Hb_001821_150 Hb_001821_150 Hb_000161_210--Hb_001821_150 Hb_000352_300 Hb_000352_300 Hb_000161_210--Hb_000352_300 Hb_001703_050 Hb_001703_050 Hb_000161_210--Hb_001703_050 Hb_030982_010 Hb_030982_010 Hb_000161_210--Hb_030982_010 Hb_003994_220 Hb_003994_220 Hb_003038_040--Hb_003994_220 Hb_001097_040 Hb_001097_040 Hb_003038_040--Hb_001097_040 Hb_065500_020 Hb_065500_020 Hb_003038_040--Hb_065500_020 Hb_001159_030 Hb_001159_030 Hb_003038_040--Hb_001159_030 Hb_010042_030 Hb_010042_030 Hb_003038_040--Hb_010042_030 Hb_007982_030--Hb_001821_150 Hb_001789_030 Hb_001789_030 Hb_007982_030--Hb_001789_030 Hb_002675_030 Hb_002675_030 Hb_007982_030--Hb_002675_030 Hb_001552_030 Hb_001552_030 Hb_007982_030--Hb_001552_030 Hb_000579_240 Hb_000579_240 Hb_007982_030--Hb_000579_240 Hb_000130_180 Hb_000130_180 Hb_001821_150--Hb_000130_180 Hb_002284_250 Hb_002284_250 Hb_001821_150--Hb_002284_250 Hb_001821_150--Hb_003038_040 Hb_003417_010 Hb_003417_010 Hb_001821_150--Hb_003417_010 Hb_007481_010 Hb_007481_010 Hb_000352_300--Hb_007481_010 Hb_003528_030 Hb_003528_030 Hb_000352_300--Hb_003528_030 Hb_000184_070 Hb_000184_070 Hb_000352_300--Hb_000184_070 Hb_000477_100 Hb_000477_100 Hb_000352_300--Hb_000477_100 Hb_000046_500 Hb_000046_500 Hb_000352_300--Hb_000046_500 Hb_003683_020 Hb_003683_020 Hb_000352_300--Hb_003683_020 Hb_001269_600 Hb_001269_600 Hb_001703_050--Hb_001269_600 Hb_001703_050--Hb_003994_220 Hb_001703_050--Hb_065500_020 Hb_011214_160 Hb_011214_160 Hb_001703_050--Hb_011214_160 Hb_001703_050--Hb_000352_300 Hb_001703_050--Hb_000184_070 Hb_121089_030 Hb_121089_030 Hb_030982_010--Hb_121089_030 Hb_001246_130 Hb_001246_130 Hb_030982_010--Hb_001246_130 Hb_000320_290 Hb_000320_290 Hb_030982_010--Hb_000320_290 Hb_006120_050 Hb_006120_050 Hb_030982_010--Hb_006120_050 Hb_000163_090 Hb_000163_090 Hb_030982_010--Hb_000163_090 Hb_021165_010 Hb_021165_010 Hb_030982_010--Hb_021165_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.27866 9.43605 12.4087 20.3934 11.4353 9.00723
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.61225 4.56849 7.95742 17.6168 9.91756

CAGE analysis