Hb_000161_230

Information

Type -
Description -
Location Contig161: 252146-255002
Sequence    

Annotation

kegg
ID rcu:RCOM_0759770
description lactoylglutathione lyase, putative
nr
ID XP_002526462.1
description lactoylglutathione lyase, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SKE3
description Lactoylglutathione lyase, putative OS=Ricinus communis GN=RCOM_0759770 PE=4 SV=1
Gene Ontology
ID GO:0016740
description lactoylglutathione lyase glyoxalase i family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14442: 252230-255246 , PASA_asmbl_14443: 253218-253457
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000161_230 0.0 - - lactoylglutathione lyase, putative [Ricinus communis]
2 Hb_000187_110 0.0653392573 - - PREDICTED: serine carboxypeptidase-like 7 [Jatropha curcas]
3 Hb_000544_130 0.120900817 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
4 Hb_001633_120 0.1228229645 - - PREDICTED: uncharacterized protein LOC105630199 [Jatropha curcas]
5 Hb_003226_050 0.1348306661 - - Pectinesterase-3 precursor, putative [Ricinus communis]
6 Hb_001158_110 0.1451284552 - - PREDICTED: uncharacterized protein LOC105648901 [Jatropha curcas]
7 Hb_003020_340 0.1463301993 - - PREDICTED: uncharacterized protein LOC105631327 [Jatropha curcas]
8 Hb_000979_080 0.146913245 - - PREDICTED: 21 kDa protein-like [Jatropha curcas]
9 Hb_001002_090 0.1469141733 - - PREDICTED: receptor protein kinase-like protein At4g34220 [Jatropha curcas]
10 Hb_055440_010 0.1478657794 - - protein binding protein, putative [Ricinus communis]
11 Hb_000002_150 0.1484782054 - - conserved hypothetical protein [Ricinus communis]
12 Hb_021888_010 0.1487680554 - - PREDICTED: aspartic proteinase-like protein 1 isoform X1 [Jatropha curcas]
13 Hb_004984_020 0.1515315879 - - PREDICTED: uncharacterized protein LOC105647814 [Jatropha curcas]
14 Hb_002437_010 0.1548209465 - - PREDICTED: uncharacterized protein LOC105123193 [Populus euphratica]
15 Hb_000364_130 0.1558753733 - - unnamed protein product [Vitis vinifera]
16 Hb_000086_720 0.1575151217 - - leucoanthocyanidin dioxygenase, putative [Ricinus communis]
17 Hb_178252_010 0.1580417051 - - hypothetical protein POPTR_0018s01890g [Populus trichocarpa]
18 Hb_006834_010 0.1585469977 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002559_010 0.159610519 - - hypothetical protein JCGZ_06274 [Jatropha curcas]
20 Hb_010598_010 0.1694003081 - - PREDICTED: ankyrin-1-like [Jatropha curcas]

Gene co-expression network

sample Hb_000161_230 Hb_000161_230 Hb_000187_110 Hb_000187_110 Hb_000161_230--Hb_000187_110 Hb_000544_130 Hb_000544_130 Hb_000161_230--Hb_000544_130 Hb_001633_120 Hb_001633_120 Hb_000161_230--Hb_001633_120 Hb_003226_050 Hb_003226_050 Hb_000161_230--Hb_003226_050 Hb_001158_110 Hb_001158_110 Hb_000161_230--Hb_001158_110 Hb_003020_340 Hb_003020_340 Hb_000161_230--Hb_003020_340 Hb_000979_080 Hb_000979_080 Hb_000187_110--Hb_000979_080 Hb_001002_090 Hb_001002_090 Hb_000187_110--Hb_001002_090 Hb_000187_110--Hb_003226_050 Hb_055440_010 Hb_055440_010 Hb_000187_110--Hb_055440_010 Hb_000187_110--Hb_001633_120 Hb_000544_130--Hb_003226_050 Hb_002217_040 Hb_002217_040 Hb_000544_130--Hb_002217_040 Hb_000544_130--Hb_000187_110 Hb_000544_130--Hb_000979_080 Hb_001252_070 Hb_001252_070 Hb_000544_130--Hb_001252_070 Hb_000705_110 Hb_000705_110 Hb_001633_120--Hb_000705_110 Hb_002437_010 Hb_002437_010 Hb_001633_120--Hb_002437_010 Hb_001242_020 Hb_001242_020 Hb_001633_120--Hb_001242_020 Hb_001633_120--Hb_003226_050 Hb_000364_130 Hb_000364_130 Hb_003226_050--Hb_000364_130 Hb_003768_100 Hb_003768_100 Hb_003226_050--Hb_003768_100 Hb_003226_050--Hb_000979_080 Hb_000086_720 Hb_000086_720 Hb_001158_110--Hb_000086_720 Hb_001288_020 Hb_001288_020 Hb_001158_110--Hb_001288_020 Hb_021888_010 Hb_021888_010 Hb_001158_110--Hb_021888_010 Hb_001158_110--Hb_000187_110 Hb_001158_110--Hb_001002_090 Hb_072997_010 Hb_072997_010 Hb_001158_110--Hb_072997_010 Hb_000002_150 Hb_000002_150 Hb_003020_340--Hb_000002_150 Hb_000925_120 Hb_000925_120 Hb_003020_340--Hb_000925_120 Hb_055154_010 Hb_055154_010 Hb_003020_340--Hb_055154_010 Hb_000147_010 Hb_000147_010 Hb_003020_340--Hb_000147_010 Hb_005356_030 Hb_005356_030 Hb_003020_340--Hb_005356_030 Hb_003480_010 Hb_003480_010 Hb_003020_340--Hb_003480_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0959591 2.22963 23.2638 26.5113 0 0.0401668
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.294889 0.289812 0.312544 40.4739 0.577741

CAGE analysis