Hb_000163_140

Information

Type -
Description -
Location Contig163: 89463-96651
Sequence    

Annotation

kegg
ID rcu:RCOM_1178320
description Monoglyceride lipase, putative (EC:3.1.1.23)
nr
ID XP_012082772.1
description PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
swissprot
ID Q9C942
description Caffeoylshikimate esterase OS=Arabidopsis thaliana GN=CSE PE=1 SV=1
trembl
ID A0A067K7D3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13936 PE=4 SV=1
Gene Ontology
ID GO:0047372
description caffeoylshikimate esterase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000163_140 0.0 - - PREDICTED: caffeoylshikimate esterase [Jatropha curcas]
2 Hb_000445_310 0.0610600954 - - hypothetical protein B456_011G218000 [Gossypium raimondii]
3 Hb_002918_170 0.1023677961 - - PREDICTED: MACPF domain-containing protein NSL1 [Jatropha curcas]
4 Hb_001958_030 0.1033381769 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
5 Hb_000300_070 0.1064464849 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
6 Hb_003387_010 0.1117096103 - - PREDICTED: protein kinase PINOID 2 [Gossypium raimondii]
7 Hb_000188_070 0.1226403019 - - calcineurin-like phosphoesterase [Manihot esculenta]
8 Hb_001544_060 0.1235081218 transcription factor TF Family: MYB PREDICTED: transcription repressor MYB4 isoform X2 [Jatropha curcas]
9 Hb_028707_120 0.1308905525 - - PREDICTED: uncharacterized protein LOC105645799 isoform X2 [Jatropha curcas]
10 Hb_001476_040 0.1332915761 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
11 Hb_033834_020 0.1354303071 - - conserved hypothetical protein [Ricinus communis]
12 Hb_145188_010 0.136701927 - - PREDICTED: endochitinase PR4-like [Jatropha curcas]
13 Hb_002710_040 0.1390085855 - - PREDICTED: cyclin-D3-3-like [Jatropha curcas]
14 Hb_000252_240 0.1404128143 - - PREDICTED: protein TRANSPARENT TESTA 12-like isoform X2 [Gossypium raimondii]
15 Hb_000692_060 0.1491149903 - - calcium-dependent protein kinase, putative [Ricinus communis]
16 Hb_163950_090 0.1491543437 - - PREDICTED: traB domain-containing protein isoform X1 [Jatropha curcas]
17 Hb_001638_190 0.1502605798 - - PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Jatropha curcas]
18 Hb_002025_290 0.1521464544 transcription factor TF Family: G2-like conserved hypothetical protein [Ricinus communis]
19 Hb_004218_060 0.1541163436 - - annexin [Manihot esculenta]
20 Hb_005116_130 0.1555728349 - - PREDICTED: chloroplast stem-loop binding protein of 41 kDa a, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_000163_140 Hb_000163_140 Hb_000445_310 Hb_000445_310 Hb_000163_140--Hb_000445_310 Hb_002918_170 Hb_002918_170 Hb_000163_140--Hb_002918_170 Hb_001958_030 Hb_001958_030 Hb_000163_140--Hb_001958_030 Hb_000300_070 Hb_000300_070 Hb_000163_140--Hb_000300_070 Hb_003387_010 Hb_003387_010 Hb_000163_140--Hb_003387_010 Hb_000188_070 Hb_000188_070 Hb_000163_140--Hb_000188_070 Hb_001544_060 Hb_001544_060 Hb_000445_310--Hb_001544_060 Hb_000445_310--Hb_000300_070 Hb_000252_240 Hb_000252_240 Hb_000445_310--Hb_000252_240 Hb_000445_310--Hb_001958_030 Hb_000445_310--Hb_000188_070 Hb_002918_170--Hb_003387_010 Hb_002918_170--Hb_001958_030 Hb_002918_170--Hb_000188_070 Hb_089736_010 Hb_089736_010 Hb_002918_170--Hb_089736_010 Hb_104014_010 Hb_104014_010 Hb_002918_170--Hb_104014_010 Hb_001958_030--Hb_000188_070 Hb_000692_060 Hb_000692_060 Hb_001958_030--Hb_000692_060 Hb_002710_040 Hb_002710_040 Hb_001958_030--Hb_002710_040 Hb_033834_020 Hb_033834_020 Hb_001958_030--Hb_033834_020 Hb_001638_190 Hb_001638_190 Hb_001958_030--Hb_001638_190 Hb_001958_030--Hb_003387_010 Hb_000300_070--Hb_000252_240 Hb_000300_070--Hb_001544_060 Hb_124677_010 Hb_124677_010 Hb_000300_070--Hb_124677_010 Hb_002025_290 Hb_002025_290 Hb_000300_070--Hb_002025_290 Hb_003387_010--Hb_002710_040 Hb_003387_010--Hb_089736_010 Hb_004223_120 Hb_004223_120 Hb_003387_010--Hb_004223_120 Hb_000084_210 Hb_000084_210 Hb_003387_010--Hb_000084_210 Hb_000188_070--Hb_033834_020 Hb_000188_070--Hb_000692_060 Hb_007254_010 Hb_007254_010 Hb_000188_070--Hb_007254_010 Hb_000188_070--Hb_001638_190 Hb_000928_100 Hb_000928_100 Hb_000188_070--Hb_000928_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0488168 0.916557 0.0712724 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0924839 0.340585

CAGE analysis