Hb_000165_130

Information

Type -
Description -
Location Contig165: 113082-113825
Sequence    

Annotation

kegg
ID pop:POPTR_0008s07220g
description hypothetical protein
nr
ID XP_012086914.1
description PREDICTED: uncharacterized protein At5g39865-like [Jatropha curcas]
swissprot
ID Q9FLE8
description Uncharacterized protein At5g39865 OS=Arabidopsis thaliana GN=At5g39865 PE=2 SV=1
trembl
ID A0A067LJC7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01220 PE=4 SV=1
Gene Ontology
ID GO:0009055
description glutaredoxin family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_15196: 113235-113966
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000165_130 0.0 - - PREDICTED: uncharacterized protein At5g39865-like [Jatropha curcas]
2 Hb_002025_140 0.077198716 - - PREDICTED: UBX domain-containing protein 2 isoform X1 [Jatropha curcas]
3 Hb_000849_100 0.081357927 - - PREDICTED: uncharacterized protein LOC105644134 [Jatropha curcas]
4 Hb_000134_360 0.0842929254 - - PREDICTED: protein gar2 [Jatropha curcas]
5 Hb_001969_040 0.0869767827 - - PREDICTED: serine-threonine kinase receptor-associated protein-like [Jatropha curcas]
6 Hb_002493_090 0.0883297991 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 2 isoform X2 [Jatropha curcas]
7 Hb_000732_020 0.0899250615 - - PREDICTED: universal stress protein A-like protein [Jatropha curcas]
8 Hb_003216_110 0.0902502737 - - PREDICTED: vacuolar protein-sorting-associated protein 11 homolog [Jatropha curcas]
9 Hb_001498_030 0.0904360786 - - PREDICTED: eukaryotic translation initiation factor 3 subunit E [Populus euphratica]
10 Hb_012977_010 0.0909822799 - - PREDICTED: uncharacterized protein LOC105131558 [Populus euphratica]
11 Hb_007534_040 0.0947015925 - - PREDICTED: uncharacterized protein LOC105635538 [Jatropha curcas]
12 Hb_005725_070 0.0967348362 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004032_350 0.0970629057 - - PREDICTED: splicing factor U2af small subunit B-like isoform X1 [Musa acuminata subsp. malaccensis]
14 Hb_001975_020 0.097522786 - - PREDICTED: uncharacterized protein LOC105637186 [Jatropha curcas]
15 Hb_003716_020 0.0984510973 - - PREDICTED: putative vesicle-associated membrane protein 726 [Jatropha curcas]
16 Hb_004678_020 0.0989351754 - - PREDICTED: protein YIF1B [Jatropha curcas]
17 Hb_004531_090 0.099384779 - - PREDICTED: VHS domain-containing protein At3g16270 [Jatropha curcas]
18 Hb_079326_010 0.0993973508 - - PREDICTED: uncharacterized protein LOC105630719 isoform X1 [Jatropha curcas]
19 Hb_000363_340 0.0997198826 - - PREDICTED: syntaxin-52-like isoform X2 [Jatropha curcas]
20 Hb_000291_120 0.1001026794 transcription factor TF Family: ARF PREDICTED: auxin response factor 17 [Jatropha curcas]

Gene co-expression network

sample Hb_000165_130 Hb_000165_130 Hb_002025_140 Hb_002025_140 Hb_000165_130--Hb_002025_140 Hb_000849_100 Hb_000849_100 Hb_000165_130--Hb_000849_100 Hb_000134_360 Hb_000134_360 Hb_000165_130--Hb_000134_360 Hb_001969_040 Hb_001969_040 Hb_000165_130--Hb_001969_040 Hb_002493_090 Hb_002493_090 Hb_000165_130--Hb_002493_090 Hb_000732_020 Hb_000732_020 Hb_000165_130--Hb_000732_020 Hb_000573_040 Hb_000573_040 Hb_002025_140--Hb_000573_040 Hb_004531_090 Hb_004531_090 Hb_002025_140--Hb_004531_090 Hb_000173_370 Hb_000173_370 Hb_002025_140--Hb_000173_370 Hb_003216_110 Hb_003216_110 Hb_002025_140--Hb_003216_110 Hb_004032_350 Hb_004032_350 Hb_002025_140--Hb_004032_350 Hb_000631_150 Hb_000631_150 Hb_000849_100--Hb_000631_150 Hb_000849_100--Hb_000134_360 Hb_006002_030 Hb_006002_030 Hb_000849_100--Hb_006002_030 Hb_003716_020 Hb_003716_020 Hb_000849_100--Hb_003716_020 Hb_002725_070 Hb_002725_070 Hb_000849_100--Hb_002725_070 Hb_002235_320 Hb_002235_320 Hb_000849_100--Hb_002235_320 Hb_000134_360--Hb_000631_150 Hb_001486_120 Hb_001486_120 Hb_000134_360--Hb_001486_120 Hb_008528_010 Hb_008528_010 Hb_000134_360--Hb_008528_010 Hb_000003_790 Hb_000003_790 Hb_000134_360--Hb_000003_790 Hb_005000_270 Hb_005000_270 Hb_000134_360--Hb_005000_270 Hb_000462_150 Hb_000462_150 Hb_001969_040--Hb_000462_150 Hb_000186_280 Hb_000186_280 Hb_001969_040--Hb_000186_280 Hb_003384_030 Hb_003384_030 Hb_001969_040--Hb_003384_030 Hb_018663_020 Hb_018663_020 Hb_001969_040--Hb_018663_020 Hb_004324_280 Hb_004324_280 Hb_001969_040--Hb_004324_280 Hb_002818_040 Hb_002818_040 Hb_001969_040--Hb_002818_040 Hb_003018_160 Hb_003018_160 Hb_002493_090--Hb_003018_160 Hb_004143_070 Hb_004143_070 Hb_002493_090--Hb_004143_070 Hb_001975_020 Hb_001975_020 Hb_002493_090--Hb_001975_020 Hb_000335_010 Hb_000335_010 Hb_002493_090--Hb_000335_010 Hb_031754_010 Hb_031754_010 Hb_002493_090--Hb_031754_010 Hb_002493_090--Hb_000849_100 Hb_002955_010 Hb_002955_010 Hb_000732_020--Hb_002955_010 Hb_113216_010 Hb_113216_010 Hb_000732_020--Hb_113216_010 Hb_001582_030 Hb_001582_030 Hb_000732_020--Hb_001582_030 Hb_002986_050 Hb_002986_050 Hb_000732_020--Hb_002986_050 Hb_000322_170 Hb_000322_170 Hb_000732_020--Hb_000322_170 Hb_000270_450 Hb_000270_450 Hb_000732_020--Hb_000270_450
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
93.6577 33.3861 13.624 25.5416 103.83 97.0673
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
41.5876 20.0626 28.4714 11.988 11.6516

CAGE analysis