Hb_000166_060

Information

Type -
Description -
Location Contig166: 120515-121321
Sequence    

Annotation

kegg
ID rcu:RCOM_0813660
description hypothetical protein
nr
ID XP_002518775.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID B6TZ45
description Cell number regulator 1 OS=Zea mays GN=CNR1 PE=2 SV=1
trembl
ID B9RYJ1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0813660 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000166_060 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_003777_170 0.1653479031 - - conserved hypothetical protein [Ricinus communis]
3 Hb_006018_060 0.2625234291 - - Zinc finger SWIM domain-containing protein 7 isoform 1 [Theobroma cacao]
4 Hb_185224_010 0.2700266435 - - zinc finger protein, putative [Ricinus communis]
5 Hb_001504_140 0.2749571202 - - PREDICTED: deSI-like protein At4g17486 [Populus euphratica]
6 Hb_000042_220 0.2764163765 - - PREDICTED: uncharacterized protein LOC105632809 [Jatropha curcas]
7 Hb_011472_010 0.2764249786 - - PREDICTED: protein yippee-like [Jatropha curcas]
8 Hb_001959_130 0.2827836147 - - transporter, putative [Ricinus communis]
9 Hb_001930_090 0.2903383396 - - DNA binding protein, putative [Ricinus communis]
10 Hb_000732_210 0.2949816805 - - hexose transporter 1 [Hevea brasiliensis]
11 Hb_007553_010 0.2968804466 - - -
12 Hb_001828_030 0.29778503 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
13 Hb_015430_010 0.302720924 - - PREDICTED: uncharacterized protein LOC105125506 isoform X2 [Populus euphratica]
14 Hb_116420_020 0.3035024085 - - Phytosulfokines 3 precursor family protein [Populus trichocarpa]
15 Hb_001635_020 0.306418396 - - PREDICTED: inorganic pyrophosphatase 1-like [Jatropha curcas]
16 Hb_011909_110 0.3076001014 - - PREDICTED: uncharacterized protein LOC105633210 [Jatropha curcas]
17 Hb_000007_040 0.3076681912 - - hypothetical protein MIMGU_mgv1a017616mg [Erythranthe guttata]
18 Hb_000676_340 0.3085360378 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_036790_020 0.3085752921 - - PREDICTED: polyadenylate-binding protein 3 [Jatropha curcas]
20 Hb_003581_300 0.3102421498 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105630404 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000166_060 Hb_000166_060 Hb_003777_170 Hb_003777_170 Hb_000166_060--Hb_003777_170 Hb_006018_060 Hb_006018_060 Hb_000166_060--Hb_006018_060 Hb_185224_010 Hb_185224_010 Hb_000166_060--Hb_185224_010 Hb_001504_140 Hb_001504_140 Hb_000166_060--Hb_001504_140 Hb_000042_220 Hb_000042_220 Hb_000166_060--Hb_000042_220 Hb_011472_010 Hb_011472_010 Hb_000166_060--Hb_011472_010 Hb_007120_040 Hb_007120_040 Hb_003777_170--Hb_007120_040 Hb_003777_170--Hb_011472_010 Hb_001930_090 Hb_001930_090 Hb_003777_170--Hb_001930_090 Hb_002572_030 Hb_002572_030 Hb_003777_170--Hb_002572_030 Hb_007553_010 Hb_007553_010 Hb_003777_170--Hb_007553_010 Hb_003581_300 Hb_003581_300 Hb_006018_060--Hb_003581_300 Hb_002157_040 Hb_002157_040 Hb_006018_060--Hb_002157_040 Hb_015430_010 Hb_015430_010 Hb_006018_060--Hb_015430_010 Hb_000676_340 Hb_000676_340 Hb_006018_060--Hb_000676_340 Hb_000178_120 Hb_000178_120 Hb_006018_060--Hb_000178_120 Hb_002260_030 Hb_002260_030 Hb_006018_060--Hb_002260_030 Hb_000200_200 Hb_000200_200 Hb_185224_010--Hb_000200_200 Hb_000031_080 Hb_000031_080 Hb_185224_010--Hb_000031_080 Hb_008215_030 Hb_008215_030 Hb_185224_010--Hb_008215_030 Hb_000340_500 Hb_000340_500 Hb_185224_010--Hb_000340_500 Hb_185224_010--Hb_015430_010 Hb_000173_050 Hb_000173_050 Hb_185224_010--Hb_000173_050 Hb_144484_010 Hb_144484_010 Hb_001504_140--Hb_144484_010 Hb_005671_020 Hb_005671_020 Hb_001504_140--Hb_005671_020 Hb_001635_020 Hb_001635_020 Hb_001504_140--Hb_001635_020 Hb_002473_110 Hb_002473_110 Hb_001504_140--Hb_002473_110 Hb_001504_140--Hb_011472_010 Hb_158092_010 Hb_158092_010 Hb_001504_140--Hb_158092_010 Hb_000042_220--Hb_001504_140 Hb_000042_220--Hb_011472_010 Hb_002835_430 Hb_002835_430 Hb_000042_220--Hb_002835_430 Hb_001712_040 Hb_001712_040 Hb_000042_220--Hb_001712_040 Hb_000042_220--Hb_144484_010 Hb_007672_030 Hb_007672_030 Hb_000042_220--Hb_007672_030 Hb_012163_020 Hb_012163_020 Hb_011472_010--Hb_012163_020 Hb_000732_210 Hb_000732_210 Hb_011472_010--Hb_000732_210 Hb_007943_190 Hb_007943_190 Hb_011472_010--Hb_007943_190 Hb_001377_420 Hb_001377_420 Hb_011472_010--Hb_001377_420 Hb_000922_120 Hb_000922_120 Hb_011472_010--Hb_000922_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0569978 0.200625 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.345289 0.135604 0.221935 0.172051 0

CAGE analysis