Hb_000172_130

Information

Type -
Description -
Location Contig172: 181434-184735
Sequence    

Annotation

kegg
ID rcu:RCOM_0662430
description type I inositol polyphosphate 5-phosphatase, putative (EC:1.3.1.74)
nr
ID KDP46867.1
description hypothetical protein JCGZ_24076 [Jatropha curcas]
swissprot
ID Q9LR47
description Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 OS=Arabidopsis thaliana GN=CVP2 PE=1 SV=2
trembl
ID A0A067LEQ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24076 PE=4 SV=1
Gene Ontology
ID GO:0016787
description type i inositol -trisphosphate 5-phosphatase cvp2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000172_130 0.0 - - hypothetical protein JCGZ_24076 [Jatropha curcas]
2 Hb_004195_220 0.2556548789 - - hypothetical protein PRUPE_ppa005288mg [Prunus persica]
3 Hb_167183_010 0.2584077327 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
4 Hb_057451_040 0.2589725134 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
5 Hb_001206_010 0.2669749759 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
6 Hb_143874_010 0.2676088268 - - PREDICTED: uncharacterized protein LOC105794100 [Gossypium raimondii]
7 Hb_151320_010 0.2717701647 - - -
8 Hb_170156_010 0.2927355696 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
9 Hb_011478_010 0.2994279736 - - -
10 Hb_003711_030 0.3033451183 - - PREDICTED: uncharacterized protein LOC102621950 [Citrus sinensis]
11 Hb_014879_010 0.3068435976 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
12 Hb_000165_150 0.3216594804 - - PREDICTED: pistil-specific extensin-like protein [Jatropha curcas]
13 Hb_022132_020 0.322642672 - - hypothetical protein TRIUR3_12476 [Triticum urartu]
14 Hb_132384_010 0.3290120481 - - hypothetical protein VITISV_018559 [Vitis vinifera]
15 Hb_004212_040 0.3299786784 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
16 Hb_004989_010 0.3305028956 - - retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa Japonica Group]
17 Hb_017184_010 0.3305029108 - - PREDICTED: uncharacterized protein LOC105778857 [Gossypium raimondii]
18 Hb_008601_020 0.3305029371 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
19 Hb_004019_060 0.3305029425 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
20 Hb_004078_030 0.3305029624 - - Putative polyprotein, identical [Solanum demissum]

Gene co-expression network

sample Hb_000172_130 Hb_000172_130 Hb_004195_220 Hb_004195_220 Hb_000172_130--Hb_004195_220 Hb_167183_010 Hb_167183_010 Hb_000172_130--Hb_167183_010 Hb_057451_040 Hb_057451_040 Hb_000172_130--Hb_057451_040 Hb_001206_010 Hb_001206_010 Hb_000172_130--Hb_001206_010 Hb_143874_010 Hb_143874_010 Hb_000172_130--Hb_143874_010 Hb_151320_010 Hb_151320_010 Hb_000172_130--Hb_151320_010 Hb_004195_220--Hb_151320_010 Hb_132384_010 Hb_132384_010 Hb_004195_220--Hb_132384_010 Hb_053079_010 Hb_053079_010 Hb_004195_220--Hb_053079_010 Hb_170156_010 Hb_170156_010 Hb_004195_220--Hb_170156_010 Hb_007790_040 Hb_007790_040 Hb_004195_220--Hb_007790_040 Hb_011478_010 Hb_011478_010 Hb_167183_010--Hb_011478_010 Hb_003711_030 Hb_003711_030 Hb_167183_010--Hb_003711_030 Hb_141425_010 Hb_141425_010 Hb_167183_010--Hb_141425_010 Hb_000987_110 Hb_000987_110 Hb_167183_010--Hb_000987_110 Hb_123396_010 Hb_123396_010 Hb_167183_010--Hb_123396_010 Hb_009268_030 Hb_009268_030 Hb_167183_010--Hb_009268_030 Hb_000268_100 Hb_000268_100 Hb_057451_040--Hb_000268_100 Hb_057451_040--Hb_011478_010 Hb_057451_040--Hb_003711_030 Hb_115656_010 Hb_115656_010 Hb_057451_040--Hb_115656_010 Hb_004212_040 Hb_004212_040 Hb_057451_040--Hb_004212_040 Hb_002025_090 Hb_002025_090 Hb_057451_040--Hb_002025_090 Hb_014879_010 Hb_014879_010 Hb_001206_010--Hb_014879_010 Hb_024411_010 Hb_024411_010 Hb_001206_010--Hb_024411_010 Hb_001206_010--Hb_057451_040 Hb_038044_020 Hb_038044_020 Hb_001206_010--Hb_038044_020 Hb_001062_020 Hb_001062_020 Hb_001206_010--Hb_001062_020 Hb_001987_010 Hb_001987_010 Hb_143874_010--Hb_001987_010 Hb_000205_340 Hb_000205_340 Hb_143874_010--Hb_000205_340 Hb_003551_030 Hb_003551_030 Hb_143874_010--Hb_003551_030 Hb_000296_060 Hb_000296_060 Hb_143874_010--Hb_000296_060 Hb_001693_040 Hb_001693_040 Hb_143874_010--Hb_001693_040 Hb_013420_120 Hb_013420_120 Hb_151320_010--Hb_013420_120 Hb_151320_010--Hb_000987_110 Hb_151320_010--Hb_141425_010 Hb_151320_010--Hb_123396_010 Hb_005742_010 Hb_005742_010 Hb_151320_010--Hb_005742_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00980936 0 0 0 0.0116523
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0400941 0 0.0446635

CAGE analysis