Hb_000172_230

Information

Type -
Description -
Location Contig172: 254090-257321
Sequence    

Annotation

kegg
ID rcu:RCOM_0197350
description myo-inositol-1 phosphate synthase, putative (EC:5.5.1.4)
nr
ID AFD61599.1
description myo-inositol-1 phosphate synthase [Hevea brasiliensis]
swissprot
ID Q9FYV1
description Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1
trembl
ID H9BMN3
description Myo-inositol-1 phosphate synthase OS=Hevea brasiliensis GN=MIPS PE=2 SV=1
Gene Ontology
ID GO:0005737
description inositol-3-phosphate synthase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16132: 254178-257265
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000172_230 0.0 - - myo-inositol-1 phosphate synthase [Hevea brasiliensis]
2 Hb_036029_020 0.1195904443 - - PREDICTED: patellin-3-like [Jatropha curcas]
3 Hb_001675_290 0.130332891 - - PREDICTED: transcription factor bHLH68-like isoform X1 [Jatropha curcas]
4 Hb_008643_020 0.1329112923 - - Cf-4/9 disease resistance-like family protein [Populus trichocarpa]
5 Hb_007749_020 0.133199637 - - receptor-kinase, putative [Ricinus communis]
6 Hb_076771_010 0.1470734176 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
7 Hb_001675_310 0.1517660675 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA27-like isoform X1 [Jatropha curcas]
8 Hb_000532_150 0.1532608139 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
9 Hb_000139_050 0.1542525537 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
10 Hb_049915_010 0.1556541832 - - PREDICTED: uncharacterized serine-rich protein C215.13 [Jatropha curcas]
11 Hb_002233_080 0.1564802376 - - hypothetical protein JCGZ_00222 [Jatropha curcas]
12 Hb_101370_010 0.1587685286 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
13 Hb_000010_220 0.1635955 - - PREDICTED: uncharacterized protein LOC105640277 [Jatropha curcas]
14 Hb_002597_030 0.1644544707 - - -
15 Hb_004374_170 0.1645185973 - - PREDICTED: gibberellin 20 oxidase 1-B [Jatropha curcas]
16 Hb_002783_210 0.1655936487 - - PREDICTED: uncharacterized protein LOC105635341 [Jatropha curcas]
17 Hb_004297_080 0.1670270517 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
18 Hb_001999_200 0.1677076595 transcription factor TF Family: C2H2 conserved hypothetical protein [Ricinus communis]
19 Hb_004453_060 0.1690316315 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2 [Jatropha curcas]
20 Hb_077694_020 0.1699976404 - - SAUR family protein [Theobroma cacao]

Gene co-expression network

sample Hb_000172_230 Hb_000172_230 Hb_036029_020 Hb_036029_020 Hb_000172_230--Hb_036029_020 Hb_001675_290 Hb_001675_290 Hb_000172_230--Hb_001675_290 Hb_008643_020 Hb_008643_020 Hb_000172_230--Hb_008643_020 Hb_007749_020 Hb_007749_020 Hb_000172_230--Hb_007749_020 Hb_076771_010 Hb_076771_010 Hb_000172_230--Hb_076771_010 Hb_001675_310 Hb_001675_310 Hb_000172_230--Hb_001675_310 Hb_071433_010 Hb_071433_010 Hb_036029_020--Hb_071433_010 Hb_036029_020--Hb_001675_290 Hb_036029_020--Hb_007749_020 Hb_002597_030 Hb_002597_030 Hb_036029_020--Hb_002597_030 Hb_004970_100 Hb_004970_100 Hb_036029_020--Hb_004970_100 Hb_001675_290--Hb_007749_020 Hb_001369_190 Hb_001369_190 Hb_001675_290--Hb_001369_190 Hb_006026_020 Hb_006026_020 Hb_001675_290--Hb_006026_020 Hb_077694_020 Hb_077694_020 Hb_001675_290--Hb_077694_020 Hb_001675_290--Hb_004970_100 Hb_049915_010 Hb_049915_010 Hb_008643_020--Hb_049915_010 Hb_120117_010 Hb_120117_010 Hb_008643_020--Hb_120117_010 Hb_002783_210 Hb_002783_210 Hb_008643_020--Hb_002783_210 Hb_101370_010 Hb_101370_010 Hb_008643_020--Hb_101370_010 Hb_004297_080 Hb_004297_080 Hb_008643_020--Hb_004297_080 Hb_003529_240 Hb_003529_240 Hb_007749_020--Hb_003529_240 Hb_107658_010 Hb_107658_010 Hb_007749_020--Hb_107658_010 Hb_002272_200 Hb_002272_200 Hb_007749_020--Hb_002272_200 Hb_002676_110 Hb_002676_110 Hb_076771_010--Hb_002676_110 Hb_002233_080 Hb_002233_080 Hb_076771_010--Hb_002233_080 Hb_001663_090 Hb_001663_090 Hb_076771_010--Hb_001663_090 Hb_029622_090 Hb_029622_090 Hb_076771_010--Hb_029622_090 Hb_000010_220 Hb_000010_220 Hb_076771_010--Hb_000010_220 Hb_010721_010 Hb_010721_010 Hb_076771_010--Hb_010721_010 Hb_000210_160 Hb_000210_160 Hb_001675_310--Hb_000210_160 Hb_003849_200 Hb_003849_200 Hb_001675_310--Hb_003849_200 Hb_000563_630 Hb_000563_630 Hb_001675_310--Hb_000563_630 Hb_001675_310--Hb_002233_080 Hb_000666_120 Hb_000666_120 Hb_001675_310--Hb_000666_120 Hb_003435_040 Hb_003435_040 Hb_001675_310--Hb_003435_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.08819 45.5814 43.0418 104.548 2.43023 7.18297
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.065807 0.0345196 1.14633 7.02982 8.35928

CAGE analysis