Hb_000174_270

Information

Type -
Description -
Location Contig174: 306226-310534
Sequence    

Annotation

kegg
ID rcu:RCOM_1076710
description type II inositol 5-phosphatase, putative (EC:3.1.3.36)
nr
ID XP_012078910.1
description PREDICTED: type II inositol 1,4,5-trisphosphate 5-phosphatase FRA3 isoform X1 [Jatropha curcas]
swissprot
ID Q84W55
description Type II inositol 1,4,5-trisphosphate 5-phosphatase FRA3 OS=Arabidopsis thaliana GN=FRA3 PE=1 SV=2
trembl
ID A0A067KBT0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13413 PE=4 SV=1
Gene Ontology
ID GO:0005515
description type ii inositol -trisphosphate 5-phosphatase fra3 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16584: 306007-317908
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000174_270 0.0 - - PREDICTED: type II inositol 1,4,5-trisphosphate 5-phosphatase FRA3 isoform X1 [Jatropha curcas]
2 Hb_003494_020 0.0464795965 - - ATP-dependent RNA and DNA helicase, putative [Ricinus communis]
3 Hb_001999_290 0.0522350752 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 7, chloroplastic-like [Jatropha curcas]
4 Hb_000028_130 0.0568055289 - - PREDICTED: uncharacterized protein LOC105645303 isoform X1 [Jatropha curcas]
5 Hb_062226_070 0.0615723024 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 4 isoform X1 [Jatropha curcas]
6 Hb_000037_190 0.0619130793 - - PREDICTED: uncharacterized protein LOC105641500 [Jatropha curcas]
7 Hb_001635_120 0.0629173098 - - PREDICTED: uncharacterized protein At1g51745-like [Jatropha curcas]
8 Hb_004182_050 0.0631299115 - - PREDICTED: serine/threonine-protein phosphatase BSL3 isoform X2 [Jatropha curcas]
9 Hb_004079_060 0.0681627324 - - hypothetical protein JCGZ_07228 [Jatropha curcas]
10 Hb_000441_090 0.0688437648 - - PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 2 [Jatropha curcas]
11 Hb_000340_530 0.0698753451 - - hypothetical protein VITISV_016664 [Vitis vinifera]
12 Hb_031042_050 0.0709460573 - - PREDICTED: protein transport protein SEC16B homolog [Jatropha curcas]
13 Hb_002205_250 0.0711563651 - - PREDICTED: probable inactive serine/threonine-protein kinase scy1 isoform X1 [Jatropha curcas]
14 Hb_000258_160 0.0712544175 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005582_040 0.0713118579 - - PREDICTED: regulator of nonsense transcripts 1 homolog [Jatropha curcas]
16 Hb_001004_060 0.0730831268 - - PREDICTED: uncharacterized protein LOC105630220 isoform X4 [Jatropha curcas]
17 Hb_003168_110 0.0731184946 transcription factor TF Family: SWI/SNF-SWI3 PREDICTED: lysine-specific histone demethylase 1 homolog 1 [Jatropha curcas]
18 Hb_002234_170 0.0731551243 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1 [Jatropha curcas]
19 Hb_002732_040 0.0741805256 - - PREDICTED: uncharacterized protein LOC105628163 isoform X1 [Jatropha curcas]
20 Hb_000866_460 0.0742662286 - - PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_000174_270 Hb_000174_270 Hb_003494_020 Hb_003494_020 Hb_000174_270--Hb_003494_020 Hb_001999_290 Hb_001999_290 Hb_000174_270--Hb_001999_290 Hb_000028_130 Hb_000028_130 Hb_000174_270--Hb_000028_130 Hb_062226_070 Hb_062226_070 Hb_000174_270--Hb_062226_070 Hb_000037_190 Hb_000037_190 Hb_000174_270--Hb_000037_190 Hb_001635_120 Hb_001635_120 Hb_000174_270--Hb_001635_120 Hb_002234_170 Hb_002234_170 Hb_003494_020--Hb_002234_170 Hb_003494_020--Hb_000028_130 Hb_000258_160 Hb_000258_160 Hb_003494_020--Hb_000258_160 Hb_003494_020--Hb_062226_070 Hb_002818_030 Hb_002818_030 Hb_003494_020--Hb_002818_030 Hb_001157_240 Hb_001157_240 Hb_001999_290--Hb_001157_240 Hb_004079_060 Hb_004079_060 Hb_001999_290--Hb_004079_060 Hb_005736_020 Hb_005736_020 Hb_001999_290--Hb_005736_020 Hb_001004_060 Hb_001004_060 Hb_001999_290--Hb_001004_060 Hb_001999_290--Hb_062226_070 Hb_031042_050 Hb_031042_050 Hb_000028_130--Hb_031042_050 Hb_000028_130--Hb_001635_120 Hb_000017_220 Hb_000017_220 Hb_000028_130--Hb_000017_220 Hb_001716_020 Hb_001716_020 Hb_000028_130--Hb_001716_020 Hb_001473_110 Hb_001473_110 Hb_000028_130--Hb_001473_110 Hb_062226_070--Hb_000028_130 Hb_062226_070--Hb_004079_060 Hb_005582_040 Hb_005582_040 Hb_062226_070--Hb_005582_040 Hb_003504_030 Hb_003504_030 Hb_000037_190--Hb_003504_030 Hb_002732_040 Hb_002732_040 Hb_000037_190--Hb_002732_040 Hb_001329_140 Hb_001329_140 Hb_000037_190--Hb_001329_140 Hb_003168_110 Hb_003168_110 Hb_000037_190--Hb_003168_110 Hb_000866_460 Hb_000866_460 Hb_000037_190--Hb_000866_460 Hb_001635_120--Hb_000017_220 Hb_001635_120--Hb_005582_040 Hb_001635_120--Hb_001999_290 Hb_001635_120--Hb_001473_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.8781 13.8301 7.75115 12.7669 10.9185 10.2757
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.06708 8.27802 12.5488 9.38614 14.3832

CAGE analysis