Hb_000175_080

Information

Type -
Description -
Location Contig175: 52111-54156
Sequence    

Annotation

kegg
ID rcu:RCOM_0901050
description Adenine phosphoribosyltransferase, putative (EC:2.4.2.7)
nr
ID KDP37067.1
description hypothetical protein JCGZ_06123 [Jatropha curcas]
swissprot
ID Q42563
description Adenine phosphoribosyltransferase 2 OS=Arabidopsis thaliana GN=APT2 PE=1 SV=1
trembl
ID A0A067KLP3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06123 PE=3 SV=1
Gene Ontology
ID GO:0005737
description adenine phosphoribosyltransferase 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16668: 51713-54126
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000175_080 0.0 - - hypothetical protein JCGZ_06123 [Jatropha curcas]
2 Hb_000336_010 0.0385341156 transcription factor TF Family: C3H zinc finger family protein [Populus trichocarpa]
3 Hb_004724_280 0.063978389 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001123_330 0.0662227088 - - PREDICTED: serine carboxypeptidase-like 45 [Jatropha curcas]
5 Hb_003420_010 0.0673890714 - - zinc finger protein, putative [Ricinus communis]
6 Hb_003680_180 0.0836979797 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
7 Hb_000059_190 0.0862354997 - - PREDICTED: uncharacterized protein LOC105121874 [Populus euphratica]
8 Hb_045150_010 0.0929533605 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
9 Hb_003529_020 0.0929997309 - - hypothetical protein JCGZ_04979 [Jatropha curcas]
10 Hb_002490_070 0.0930443871 - - PREDICTED: uncharacterized protein LOC105123384 isoform X1 [Populus euphratica]
11 Hb_000272_060 0.0930879436 - - unnamed protein product [Vitis vinifera]
12 Hb_001504_250 0.0931033518 - - ABC transporter family protein [Hevea brasiliensis]
13 Hb_000012_360 0.0931418249 - - PREDICTED: uncharacterized protein LOC104248159 [Nicotiana sylvestris]
14 Hb_001456_010 0.093192583 - - o-methyltransferase, putative [Ricinus communis]
15 Hb_002759_210 0.0932755609 - - Peroxidase 6 precursor family protein [Populus trichocarpa]
16 Hb_121058_010 0.0933258677 - - ATP binding protein, putative [Ricinus communis]
17 Hb_185246_010 0.0933308148 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
18 Hb_104011_010 0.0935197296 - - PREDICTED: serine carboxypeptidase-like 18 [Jatropha curcas]
19 Hb_009225_030 0.0935898151 - - ring finger protein, putative [Ricinus communis]
20 Hb_001279_060 0.0940307745 transcription factor TF Family: MYB hypothetical protein POPTR_0001s36220g [Populus trichocarpa]

Gene co-expression network

sample Hb_000175_080 Hb_000175_080 Hb_000336_010 Hb_000336_010 Hb_000175_080--Hb_000336_010 Hb_004724_280 Hb_004724_280 Hb_000175_080--Hb_004724_280 Hb_001123_330 Hb_001123_330 Hb_000175_080--Hb_001123_330 Hb_003420_010 Hb_003420_010 Hb_000175_080--Hb_003420_010 Hb_003680_180 Hb_003680_180 Hb_000175_080--Hb_003680_180 Hb_000059_190 Hb_000059_190 Hb_000175_080--Hb_000059_190 Hb_000336_010--Hb_004724_280 Hb_000336_010--Hb_001123_330 Hb_000336_010--Hb_003420_010 Hb_003185_040 Hb_003185_040 Hb_000336_010--Hb_003185_040 Hb_105377_010 Hb_105377_010 Hb_000336_010--Hb_105377_010 Hb_004724_280--Hb_001123_330 Hb_004724_280--Hb_003420_010 Hb_007474_010 Hb_007474_010 Hb_004724_280--Hb_007474_010 Hb_002078_070 Hb_002078_070 Hb_004724_280--Hb_002078_070 Hb_001123_330--Hb_003680_180 Hb_001123_330--Hb_003185_040 Hb_001123_330--Hb_007474_010 Hb_164853_010 Hb_164853_010 Hb_003420_010--Hb_164853_010 Hb_086720_010 Hb_086720_010 Hb_003420_010--Hb_086720_010 Hb_007407_020 Hb_007407_020 Hb_003420_010--Hb_007407_020 Hb_000295_140 Hb_000295_140 Hb_003420_010--Hb_000295_140 Hb_003680_180--Hb_000059_190 Hb_000134_300 Hb_000134_300 Hb_003680_180--Hb_000134_300 Hb_002790_010 Hb_002790_010 Hb_003680_180--Hb_002790_010 Hb_000802_070 Hb_000802_070 Hb_003680_180--Hb_000802_070 Hb_000059_190--Hb_000802_070 Hb_000059_190--Hb_000134_300 Hb_000059_190--Hb_003185_040 Hb_000059_190--Hb_000336_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 9.19537 10.0399 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.336106

CAGE analysis