Hb_000175_110

Information

Type -
Description -
Location Contig175: 72620-75923
Sequence    

Annotation

kegg
ID rcu:RCOM_0900820
description hypothetical protein
nr
ID KDP37069.1
description hypothetical protein JCGZ_06125 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KYZ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06125 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000175_110 0.0 - - hypothetical protein JCGZ_06125 [Jatropha curcas]
2 Hb_000563_110 0.0502864607 - - PREDICTED: uncharacterized protein LOC100306381 isoform X1 [Glycine max]
3 Hb_028995_020 0.0564483977 - - PREDICTED: uncharacterized protein LOC105642143 [Jatropha curcas]
4 Hb_001677_070 0.0605608017 - - PREDICTED: putative caffeoyl-CoA O-methyltransferase At1g67980 [Jatropha curcas]
5 Hb_011218_020 0.0724477674 - - conserved hypothetical protein [Ricinus communis]
6 Hb_012368_040 0.0728796758 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001652_090 0.0732045672 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003464_040 0.0772735274 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
9 Hb_006332_030 0.0792108705 - - RecName: Full=Valine N-monooxygenase 1; AltName: Full=Cytochrome P450 79D1 [Manihot esculenta]
10 Hb_008642_020 0.0808800936 - - sterol desaturase, putative [Ricinus communis]
11 Hb_007558_060 0.0841861815 - - PREDICTED: uncharacterized protein LOC105644482 [Jatropha curcas]
12 Hb_002205_220 0.084984762 transcription factor TF Family: Orphans two-component system sensor histidine kinase/response regulator, putative [Ricinus communis]
13 Hb_002045_020 0.0863871443 transcription factor TF Family: AUX/IAA auxin-induced protein aux28 [Populus trichocarpa]
14 Hb_011859_010 0.0867409269 - - hypothetical protein VITISV_027923 [Vitis vinifera]
15 Hb_000005_390 0.0870200219 - - hypothetical protein JCGZ_04862 [Jatropha curcas]
16 Hb_003226_040 0.0941250799 - - PREDICTED: endoglucanase 17 [Populus euphratica]
17 Hb_000375_200 0.0949090796 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
18 Hb_000023_030 0.0974995437 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG5 [Jatropha curcas]
19 Hb_017959_020 0.0994294582 - - hypothetical protein POPTR_0011s03440g [Populus trichocarpa]
20 Hb_000243_180 0.1022718216 - - PREDICTED: aldehyde dehydrogenase family 3 member F1 [Jatropha curcas]

Gene co-expression network

sample Hb_000175_110 Hb_000175_110 Hb_000563_110 Hb_000563_110 Hb_000175_110--Hb_000563_110 Hb_028995_020 Hb_028995_020 Hb_000175_110--Hb_028995_020 Hb_001677_070 Hb_001677_070 Hb_000175_110--Hb_001677_070 Hb_011218_020 Hb_011218_020 Hb_000175_110--Hb_011218_020 Hb_012368_040 Hb_012368_040 Hb_000175_110--Hb_012368_040 Hb_001652_090 Hb_001652_090 Hb_000175_110--Hb_001652_090 Hb_000563_110--Hb_001652_090 Hb_008642_020 Hb_008642_020 Hb_000563_110--Hb_008642_020 Hb_000005_390 Hb_000005_390 Hb_000563_110--Hb_000005_390 Hb_002045_020 Hb_002045_020 Hb_000563_110--Hb_002045_020 Hb_000563_110--Hb_012368_040 Hb_006332_030 Hb_006332_030 Hb_028995_020--Hb_006332_030 Hb_028995_020--Hb_011218_020 Hb_028995_020--Hb_000563_110 Hb_028995_020--Hb_001652_090 Hb_028995_020--Hb_012368_040 Hb_000243_180 Hb_000243_180 Hb_001677_070--Hb_000243_180 Hb_001677_070--Hb_000563_110 Hb_004117_060 Hb_004117_060 Hb_001677_070--Hb_004117_060 Hb_001921_040 Hb_001921_040 Hb_001677_070--Hb_001921_040 Hb_000023_030 Hb_000023_030 Hb_001677_070--Hb_000023_030 Hb_011218_020--Hb_006332_030 Hb_017959_020 Hb_017959_020 Hb_011218_020--Hb_017959_020 Hb_011218_020--Hb_000563_110 Hb_011218_020--Hb_001652_090 Hb_004117_240 Hb_004117_240 Hb_011218_020--Hb_004117_240 Hb_003464_040 Hb_003464_040 Hb_012368_040--Hb_003464_040 Hb_012368_040--Hb_001652_090 Hb_003226_040 Hb_003226_040 Hb_012368_040--Hb_003226_040 Hb_000193_170 Hb_000193_170 Hb_012368_040--Hb_000193_170 Hb_000375_200 Hb_000375_200 Hb_012368_040--Hb_000375_200 Hb_001652_090--Hb_000005_390 Hb_001652_090--Hb_008642_020 Hb_001652_090--Hb_002045_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 2.6855 0.421813 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0295735 0.141396

CAGE analysis