Hb_000175_320

Information

Type -
Description -
Location Contig175: 192544-194645
Sequence    

Annotation

kegg
ID rcu:RCOM_0899870
description hypothetical protein
nr
ID XP_012073182.1
description PREDICTED: formin-like protein 14 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KLQ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06143 PE=4 SV=1
Gene Ontology
ID GO:0016021
description formin-like protein 14

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000175_320 0.0 - - PREDICTED: formin-like protein 14 [Jatropha curcas]
2 Hb_003638_070 0.0988190579 - - hypothetical protein EUGRSUZ_E00638 [Eucalyptus grandis]
3 Hb_000203_020 0.107193223 - - PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
4 Hb_003038_190 0.1130970515 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105645961 [Jatropha curcas]
5 Hb_002006_130 0.1177488595 - - PREDICTED: uncharacterized protein LOC105648712 [Jatropha curcas]
6 Hb_023711_010 0.118091525 - - -
7 Hb_000265_050 0.1234571688 - - hypothetical protein CISIN_1g033530mg [Citrus sinensis]
8 Hb_086639_090 0.1261439188 - - 60S ribosomal protein L7a, putative [Ricinus communis]
9 Hb_002235_080 0.12776537 - - PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis vinifera]
10 Hb_001369_170 0.1284001305 - - PREDICTED: 60S ribosomal protein L15-1-like [Gossypium raimondii]
11 Hb_000997_120 0.1284500153 - - 40S ribosomal protein S15E [Hevea brasiliensis]
12 Hb_007120_090 0.1286880742 - - PREDICTED: 60S ribosomal protein L35 [Jatropha curcas]
13 Hb_000699_090 0.1289723508 - - cyclophilin, putative [Ricinus communis]
14 Hb_000302_280 0.1290709672 - - hypothetical protein ZEAMMB73_772347 [Zea mays]
15 Hb_000045_250 0.130324715 - - PREDICTED: uncharacterized protein LOC105646572 isoform X1 [Jatropha curcas]
16 Hb_000136_170 0.1313201728 - - PREDICTED: uncharacterized protein LOC105645501 [Jatropha curcas]
17 Hb_002226_040 0.1321933632 - - PREDICTED: uncharacterized protein LOC105641318 isoform X2 [Jatropha curcas]
18 Hb_000577_090 0.1327653102 - - PREDICTED: 50S ribosomal protein L12-1, chloroplastic-like [Jatropha curcas]
19 Hb_000676_160 0.1345821655 - - folate carrier protein, putative [Ricinus communis]
20 Hb_072922_020 0.1355294609 - - SNARE-like superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_000175_320 Hb_000175_320 Hb_003638_070 Hb_003638_070 Hb_000175_320--Hb_003638_070 Hb_000203_020 Hb_000203_020 Hb_000175_320--Hb_000203_020 Hb_003038_190 Hb_003038_190 Hb_000175_320--Hb_003038_190 Hb_002006_130 Hb_002006_130 Hb_000175_320--Hb_002006_130 Hb_023711_010 Hb_023711_010 Hb_000175_320--Hb_023711_010 Hb_000265_050 Hb_000265_050 Hb_000175_320--Hb_000265_050 Hb_003638_070--Hb_003038_190 Hb_000753_190 Hb_000753_190 Hb_003638_070--Hb_000753_190 Hb_003638_070--Hb_023711_010 Hb_000577_090 Hb_000577_090 Hb_003638_070--Hb_000577_090 Hb_000487_230 Hb_000487_230 Hb_003638_070--Hb_000487_230 Hb_000915_120 Hb_000915_120 Hb_000203_020--Hb_000915_120 Hb_012251_010 Hb_012251_010 Hb_000203_020--Hb_012251_010 Hb_007120_090 Hb_007120_090 Hb_000203_020--Hb_007120_090 Hb_000042_260 Hb_000042_260 Hb_000203_020--Hb_000042_260 Hb_000045_250 Hb_000045_250 Hb_000203_020--Hb_000045_250 Hb_000203_020--Hb_002006_130 Hb_000699_090 Hb_000699_090 Hb_003038_190--Hb_000699_090 Hb_003038_190--Hb_000203_020 Hb_002235_080 Hb_002235_080 Hb_003038_190--Hb_002235_080 Hb_000331_700 Hb_000331_700 Hb_003038_190--Hb_000331_700 Hb_000093_110 Hb_000093_110 Hb_003038_190--Hb_000093_110 Hb_002006_130--Hb_000915_120 Hb_002588_010 Hb_002588_010 Hb_002006_130--Hb_002588_010 Hb_007304_070 Hb_007304_070 Hb_002006_130--Hb_007304_070 Hb_002006_130--Hb_000331_700 Hb_002006_130--Hb_000093_110 Hb_023711_010--Hb_000753_190 Hb_001301_050 Hb_001301_050 Hb_023711_010--Hb_001301_050 Hb_086639_090 Hb_086639_090 Hb_023711_010--Hb_086639_090 Hb_000184_100 Hb_000184_100 Hb_023711_010--Hb_000184_100 Hb_000599_280 Hb_000599_280 Hb_023711_010--Hb_000599_280 Hb_002798_020 Hb_002798_020 Hb_000265_050--Hb_002798_020 Hb_004127_020 Hb_004127_020 Hb_000265_050--Hb_004127_020 Hb_005063_050 Hb_005063_050 Hb_000265_050--Hb_005063_050 Hb_000136_170 Hb_000136_170 Hb_000265_050--Hb_000136_170 Hb_003893_050 Hb_003893_050 Hb_000265_050--Hb_003893_050 Hb_004459_040 Hb_004459_040 Hb_000265_050--Hb_004459_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.07947 3.34065 1.31293 6.10425 2.96751 4.50963
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.95658 23.7199 5.23782 4.76273 5.5001

CAGE analysis